RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 ICAM5Q9UMF0 924 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 USF3Q68DE3 2245 aa10.54□□□□□ -0.72
HDAC4-202ENST00000430200 CUBNO60494 3623 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 WDR91A4D1P6 747 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 ANKRD28O15084 1053 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 ADAMDEC1O15204 470 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 SCN2BO60939 215 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 DHRS4L1P0CG22 281 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 POU2F1P14859 743 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 AGTR1P30556 359 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 SFTPDP35247 375 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 IFFO1Q0D2I5 559 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 KEAP1Q14145 624 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 ZNF239Q16600 458 aaKnown RBP10.53□□□□□ -0.72
HDAC4-202ENST00000430200 EXOC3L2Q2M3D2 409 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 KLHL26Q53HC5 615 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 OR4F3Q6IEY1 312 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 WDR93Q6P2C0 686 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 EMBQ6PCB8 327 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 SEZ6L2Q6UXD5 910 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 STAC2Q6ZMT1 411 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 CAMKMTQ7Z624 323 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 ATG4DQ86TL0 474 aaPredicted RBP10.53□□□□□ -0.72
HDAC4-202ENST00000430200 MREGQ8N565 214 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 OR2V1Q8NHB1 315 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 B4GALNT2Q8NHY0 566 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 PPP1R14CQ8TAE6 165 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 RNF128Q8TEB7 428 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 ABHD3Q8WU67 409 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 IGFBPL1Q8WX77 278 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 OR5P2Q8WZ92 322 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 TUBGCP3Q96CW5 907 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 PIK3IP1Q96FE7 263 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 STACQ99469 402 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 TMEM109Q9BVC6 243 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 UBQLN4Q9NRR5 601 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 CARD8Q9Y2G2 431 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 ABCA2Q9BZC7 2435 aa10.53□□□□□ -0.72
HDAC4-202ENST00000430200 PLCE1Q9P212 2302 aa10.52□□□□□ -0.72
HDAC4-202ENST00000430200 A0A087WZY1 265 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 PRAMEF27A3QJZ7 478 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 TMEM114B3SHH9 223 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 C9JVG2 144 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 LINC01387J3KSC0 135 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 SCDO00767 359 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 GOSR1O95249 250 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 H6PDO95479 791 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 PLAUP00749 431 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 SOAT1P35610 550 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 CCT3P49368 545 aaKnown RBP10.52□□□□□ -0.73
HDAC4-202ENST00000430200 PCYT1AP49585 367 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 CLK3P49761 638 aaKnown RBP10.52□□□□□ -0.73
HDAC4-202ENST00000430200 ZNF41P51814 821 aaPredicted RBP10.52□□□□□ -0.73
HDAC4-202ENST00000430200 C21orf58P58505 322 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 TSC22D1Q15714 1073 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 CHI3L2Q15782 390 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 KRT71Q3SY84 523 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 TNFAIP8L3Q5GJ75 292 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 CPTPQ5TA50 214 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 ZCCHC12Q6PEW1 402 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 LRIG3Q6UXM1 1119 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 CHMP1BQ7LBR1 199 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 R3HCC1LQ7Z5L2 792 aaKnown RBP10.52□□□□□ -0.73
HDAC4-202ENST00000430200 HMGN2P46Q86SG4 172 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 ANKRD46Q86W74 232 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 CIARTQ8N365 385 aaPredicted RBP10.52□□□□□ -0.73
HDAC4-202ENST00000430200 OR6K3Q8NGY3 331 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 PHOSPHO1Q8TCT1 267 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 SFXN5Q8TD22 340 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 ACTRT2Q8TDY3 377 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 ROBO4Q8WZ75 1007 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 ZBTB8AQ96BR9 441 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 CHMP6Q96FZ7 201 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 KLHL15Q96M94 604 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 MED18Q9BUE0 208 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 DUSP26Q9BV47 211 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 ACTRT3Q9BYD9 372 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 C12orf49Q9H741 205 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 AKTIPQ9H8T0 292 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 EML4Q9HC35 981 aaKnown RBP10.52□□□□□ -0.73
HDAC4-202ENST00000430200 NEUROD4Q9HD90 331 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 ASIC5Q9NY37 505 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 ING1Q9UK53 422 aaPredicted RBP10.52□□□□□ -0.73
HDAC4-202ENST00000430200 PROCRQ9UNN8 238 aa10.52□□□□□ -0.73
HDAC4-202ENST00000430200 IGHV3-15A0A0B4J1V0 119 aa10.51□□□□□ -0.73
HDAC4-202ENST00000430200 RNF103-CHMP3A0A140T963 221 aa10.51□□□□□ -0.73
HDAC4-202ENST00000430200 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.51□□□□□ -0.73
HDAC4-202ENST00000430200 KLF4O43474 513 aa10.51□□□□□ -0.73
HDAC4-202ENST00000430200 FCMRO60667 390 aa10.51□□□□□ -0.73
HDAC4-202ENST00000430200 ADAM11O75078 769 aa10.51□□□□□ -0.73
HDAC4-202ENST00000430200 ALDOCP09972 364 aaKnown RBP10.51□□□□□ -0.73
HDAC4-202ENST00000430200 FCGR2AP12318 317 aa10.51□□□□□ -0.73
HDAC4-202ENST00000430200 PRKCAP17252 672 aa10.51□□□□□ -0.73
HDAC4-202ENST00000430200 BGNP21810 368 aa10.51□□□□□ -0.73
HDAC4-202ENST00000430200 MAPK1P28482 360 aa10.51□□□□□ -0.73
HDAC4-202ENST00000430200 SERPINB5P36952 375 aa10.51□□□□□ -0.73
HDAC4-202ENST00000430200 RPS3AP61247 264 aaKnown RBP10.51□□□□□ -0.73
HDAC4-202ENST00000430200 RAC1P63000 192 aa10.51□□□□□ -0.73
HDAC4-202ENST00000430200 OCRLQ01968 901 aa10.51□□□□□ -0.73
HDAC4-202ENST00000430200 SKP2Q13309 424 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms