RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 VN1R2Q8NFZ6 395 aa11.82□□□□□ -0.52
CPNE4-201ENST00000429747 S100A13Q99584 98 aa11.82□□□□□ -0.52
CPNE4-201ENST00000429747 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.82□□□□□ -0.52
CPNE4-201ENST00000429747 PNO1Q9NRX1 252 aaKnown RBP11.82□□□□□ -0.52
CPNE4-201ENST00000429747 CENPMQ9NSP4 180 aa11.82□□□□□ -0.52
CPNE4-201ENST00000429747 ARPC1BO15143 372 aaKnown RBP11.81□□□□□ -0.52
CPNE4-201ENST00000429747 SLC43A1O75387 559 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 ALX3O95076 343 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 GTF2F2P13984 249 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 KIR2DL3P43628 341 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 ACTA2P62736 377 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 TRA2BP62995 288 aaKnown RBP11.81□□□□□ -0.52
CPNE4-201ENST00000429747 ACTG2P63267 376 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 KLHL21Q9UJP4 597 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 FARSAQ9Y285 508 aaKnown RBP11.81□□□□□ -0.52
CPNE4-201ENST00000429747 GOLGB1Q14789 3259 aaKnown RBP11.81□□□□□ -0.52
CPNE4-201ENST00000429747 SLC9B1P1A6NJY1 282 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 A8MVJ9 347 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 LRRTM2O43300 516 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 LGI1O95970 557 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 TFP02787 698 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 ALDOBP05062 364 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 FBXO45P0C2W1 286 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 CPEP16870 476 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 ETV6P41212 452 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 EFR3AQ14156 821 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 EXOSC7Q15024 291 aaKnown RBP11.81□□□□□ -0.52
CPNE4-201ENST00000429747 HBMQ6B0K9 141 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 SLC17A9Q9BYT1 436 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 UBQLN3Q9H347 655 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 NIPAL2Q9H841 368 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 SYNPO2LQ9H987 977 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 MRTO4Q9UKD2 239 aaKnown RBP11.81□□□□□ -0.52
CPNE4-201ENST00000429747 OR14I1A6ND48 311 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 C11orf98E9PRG8 122 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 RNGTTO60942 597 aaKnown RBP11.81□□□□□ -0.52
CPNE4-201ENST00000429747 TRIM3O75382 744 aaPredicted RBP11.81□□□□□ -0.52
CPNE4-201ENST00000429747 HOXB2P14652 356 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 PTPN6P29350 595 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 EVI2BP34910 448 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 OR3A3P47888 321 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 SRP9P49458 86 aaKnown RBP11.81□□□□□ -0.52
CPNE4-201ENST00000429747 ZMYND11Q15326 602 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 OR1Q1Q15612 314 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 PRAMEF17Q5VTA0 474 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 SFXN4Q6P4A7 337 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 ZNF550Q7Z398 422 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 KIF18BQ86Y91 864 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 GHSRQ92847 366 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 KIAA1143Q96AT1 154 aaPredicted RBP11.81□□□□□ -0.52
CPNE4-201ENST00000429747 CHST8Q9H2A9 424 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 TRPV4Q9HBA0 871 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 SIDT1Q9NXL6 827 aaKnown RBP11.81□□□□□ -0.52
CPNE4-201ENST00000429747 GRHPRQ9UBQ7 328 aa11.81□□□□□ -0.52
CPNE4-201ENST00000429747 ASCC3Q8N3C0 2202 aaKnown RBP11.8□□□□□ -0.52
CPNE4-201ENST00000429747 B4DGG1 531 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 ECDO95905 644 aaPredicted RBP11.8□□□□□ -0.52
CPNE4-201ENST00000429747 CHRM4P08173 479 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 TRAPPC2P0DI81 140 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 TRAPPC2BP0DI82 140 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 VAMP1P23763 118 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 CXCR1P25024 350 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 PDX1P52945 283 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 REEP5Q00765 189 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 POU4F2Q12837 409 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 GPM6BQ13491 265 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 PDE7AQ13946 482 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 CCDC58Q4VC31 144 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 MRPL2Q5T653 305 aaKnown RBP11.8□□□□□ -0.52
CPNE4-201ENST00000429747 ZNF761Q86XN6 746 aaPredicted RBP11.8□□□□□ -0.52
CPNE4-201ENST00000429747 CCDC36Q8IYA8 594 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 EPHX3Q9H6B9 360 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 RCE1Q9Y256 329 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 NOP16Q9Y3C1 178 aaKnown RBP11.8□□□□□ -0.52
CPNE4-201ENST00000429747 ARPC5O15511 151 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 RP2O75695 350 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 UCHL1P09936 223 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 ZNF823P16415 610 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 ELK1P19419 428 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 MAPK3P27361 379 aaPredicted RBP11.8□□□□□ -0.52
CPNE4-201ENST00000429747 ERVFC1P60507 584 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 CRMP1Q14194 572 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 DEFB110Q30KQ9 67 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 ZNF542PQ5EBM4 170 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 FIGLAQ6QHK4 219 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 GDF7Q7Z4P5 450 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 BBS1Q8NFJ9 593 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 GPR32P1Q8NGA4 272 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 OR4C15Q8NGM1 316 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 SFXN5Q8TD22 340 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 C15orf40Q8WUR7 153 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 GPER1Q99527 375 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 HINT3Q9NQE9 182 aaKnown RBP11.8□□□□□ -0.52
CPNE4-201ENST00000429747 KLHL9Q9P2J3 617 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 ADAM29Q9UKF5 820 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 ADH1BP00325 375 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 IL12BP29460 328 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 HTR1FP30939 366 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 P2RY2P41231 377 aa11.8□□□□□ -0.52
CPNE4-201ENST00000429747 CCR6P51684 374 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms