RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 TMEM215Q68D42 235 aa12.85□□□□□ -0.35
SGMS1-203ENST00000429490 SIGIRRQ6IA17 410 aa12.85□□□□□ -0.35
SGMS1-203ENST00000429490 GET4Q7L5D6 327 aaPredicted RBP12.85□□□□□ -0.35
SGMS1-203ENST00000429490 BOLLQ8N9W6 283 aaKnown RBP12.85□□□□□ -0.35
SGMS1-203ENST00000429490 ZNF527Q8NB42 609 aa12.85□□□□□ -0.35
SGMS1-203ENST00000429490 GOT1L1Q8NHS2 421 aaPredicted RBP12.85□□□□□ -0.35
SGMS1-203ENST00000429490 HSPA12BQ96MM6 686 aa12.85□□□□□ -0.35
SGMS1-203ENST00000429490 ZNF559Q9BR84 538 aa12.85□□□□□ -0.35
SGMS1-203ENST00000429490 SGPP1Q9BX95 441 aa12.85□□□□□ -0.35
SGMS1-203ENST00000429490 FLVCR2Q9UPI3 526 aa12.85□□□□□ -0.35
SGMS1-203ENST00000429490 LDB3O75112 727 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 SOD1P00441 154 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 TEAD1P28347 426 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 ACTR1BP42025 376 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 STARP49675 285 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 PGDP52209 483 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 ACTR1AP61163 376 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 DOC2BQ14184 412 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 PON3Q15166 354 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 TCTN1Q2MV58 587 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 C4orf46Q504U0 113 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 HSD17B12Q53GQ0 312 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 RERGQ96A58 199 aaPredicted RBP12.84□□□□□ -0.35
SGMS1-203ENST00000429490 ARRDC3Q96B67 414 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 SRMSQ9H3Y6 488 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 SLC27A6Q9Y2P4 619 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 ACOD1A6NK06 481 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 SLC22A5O76082 557 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 APOC3P02656 99 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 TFP02787 698 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 HOXB9P17482 250 aaPredicted RBP12.84□□□□□ -0.35
SGMS1-203ENST00000429490 PSMA3P25788 255 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 AK4P27144 223 aaPredicted RBP12.84□□□□□ -0.35
SGMS1-203ENST00000429490 CRMP1Q14194 572 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 GLYR1Q49A26 553 aaPredicted RBP12.84□□□□□ -0.35
SGMS1-203ENST00000429490 TOR2AQ5JU69 321 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 FAAP20Q6NZ36 180 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 ARL14Q8N4G2 192 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 ZNF680Q8NEM1 530 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 NXPE2Q96DL1 559 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 WDFY2Q96P53 400 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 PLEKHM1Q9Y4G2 1056 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 HTTP42858 3142 aa12.84□□□□□ -0.35
SGMS1-203ENST00000429490 ANXA2P2A6NMY6 339 aa12.83□□□□□ -0.35
SGMS1-203ENST00000429490 RAD1O60671 282 aa12.83□□□□□ -0.35
SGMS1-203ENST00000429490 ANXA2P07355 339 aaKnown RBP12.83□□□□□ -0.35
SGMS1-203ENST00000429490 HOXB3P14651 431 aaPredicted RBP12.83□□□□□ -0.35
SGMS1-203ENST00000429490 BSGP35613 385 aa12.83□□□□□ -0.35
SGMS1-203ENST00000429490 RAB28P51157 221 aa12.83□□□□□ -0.35
SGMS1-203ENST00000429490 ELAVL3Q14576 367 aaKnown RBP12.83□□□□□ -0.35
SGMS1-203ENST00000429490 ALKAL2Q6UX46 152 aa12.83□□□□□ -0.35
SGMS1-203ENST00000429490 NUDT18Q6ZVK8 323 aa12.83□□□□□ -0.35
SGMS1-203ENST00000429490 OOSP2Q86WS3 158 aa12.83□□□□□ -0.35
SGMS1-203ENST00000429490 SLC38A6Q8IZM9 456 aa12.83□□□□□ -0.35
SGMS1-203ENST00000429490 TTLQ8NG68 377 aa12.83□□□□□ -0.35
SGMS1-203ENST00000429490 CREB3L1Q96BA8 519 aa12.83□□□□□ -0.35
SGMS1-203ENST00000429490 MRPL48Q96GC5 212 aaKnown RBP12.83□□□□□ -0.35
SGMS1-203ENST00000429490 PDCD1LG2Q9BQ51 273 aa12.83□□□□□ -0.35
SGMS1-203ENST00000429490 DPEP2Q9H4A9 486 aa12.83□□□□□ -0.35
SGMS1-203ENST00000429490 GPN1Q9HCN4 374 aaPredicted RBP12.83□□□□□ -0.35
SGMS1-203ENST00000429490 LIPT1Q9Y234 373 aa12.83□□□□□ -0.35
SGMS1-203ENST00000429490 TRPM6Q9BX84 2022 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 SLC22A31A6NKX4 558 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 HIDE1A8MVS5 230 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 LANCL1O43813 399 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 ENDOUP21128 410 aaKnown RBP12.83□□□□□ -0.36
SGMS1-203ENST00000429490 CLDN20P56880 219 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 ZNHIT3Q15649 155 aaPredicted RBP12.83□□□□□ -0.36
SGMS1-203ENST00000429490 SLC25A35Q3KQZ1 300 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 PUS10Q3MIT2 529 aaKnown RBP12.83□□□□□ -0.36
SGMS1-203ENST00000429490 CCSAPQ6IQ19 270 aaPredicted RBP12.83□□□□□ -0.36
SGMS1-203ENST00000429490 KIF18BQ86Y91 864 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 OR4K14Q8NGD5 310 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 TMEM239Q8WW34 195 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 SMPDL3BQ92485 455 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 ZSWIM3Q96MP5 696 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 LGR4Q9BXB1 951 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 C1QTNF6Q9BXI9 259 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 NARFLQ9H6Q4 476 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 SYNPO2LQ9H987 977 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 ZSCAN32Q9NX65 697 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 OTOFQ9HC10 1997 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 A0A1W2PR48 441 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 CACNB4O00305 520 aaPredicted RBP12.83□□□□□ -0.36
SGMS1-203ENST00000429490 PLATP00750 562 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 POU3F3P20264 500 aaPredicted RBP12.83□□□□□ -0.36
SGMS1-203ENST00000429490 VEGFCP49767 419 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 E2F1Q01094 437 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 NOGQ13253 232 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 PDE7AQ13946 482 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 TMEM69Q5SWH9 247 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 HBMQ6B0K9 141 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 C1orf94Q6P1W5 598 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 GDF7Q7Z4P5 450 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 SIRT6Q8N6T7 355 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 OR4Q3Q8NH05 313 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 PFN4Q8NHR9 129 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 ABHD4Q8TB40 342 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 THAP4Q8WY91 577 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 PMEPA1Q969W9 287 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms