RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 CFAP77Q6ZQR2 320 aa8.23□□□□□ -1.09
CDH13-202ENST00000428848 RTL4Q6ZR62 310 aa8.23□□□□□ -1.09
CDH13-202ENST00000428848 TIGD4Q8IY51 512 aa8.23□□□□□ -1.09
CDH13-202ENST00000428848 GJD3Q8N144 294 aa8.23□□□□□ -1.09
CDH13-202ENST00000428848 BBS1Q8NFJ9 593 aa8.23□□□□□ -1.09
CDH13-202ENST00000428848 OR5M3Q8NGP4 307 aa8.23□□□□□ -1.09
CDH13-202ENST00000428848 OSTF1Q92882 214 aa8.23□□□□□ -1.09
CDH13-202ENST00000428848 RAB7BQ96AH8 199 aa8.23□□□□□ -1.09
CDH13-202ENST00000428848 PHF21AQ96BD5 680 aa8.23□□□□□ -1.09
CDH13-202ENST00000428848 OTUB1Q96FW1 271 aaPredicted RBP8.23□□□□□ -1.09
CDH13-202ENST00000428848 GSX2Q9BZM3 304 aa8.23□□□□□ -1.09
CDH13-202ENST00000428848 QRSL1Q9H0R6 528 aaKnown RBP8.23□□□□□ -1.09
CDH13-202ENST00000428848 SLC6A17Q9H1V8 727 aa8.23□□□□□ -1.09
CDH13-202ENST00000428848 SLC23A2Q9UGH3 650 aa8.23□□□□□ -1.09
CDH13-202ENST00000428848 SCML1Q9UN30 329 aa8.23□□□□□ -1.09
CDH13-202ENST00000428848 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.23□□□□□ -1.09
CDH13-202ENST00000428848 HRH3Q9Y5N1 445 aa8.23□□□□□ -1.09
CDH13-202ENST00000428848 GOLGA4Q13439 2230 aaKnown RBP8.23□□□□□ -1.09
CDH13-202ENST00000428848 A0A1B0GVI7 797 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 LINC01553A4QN01 128 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 LRIT2A6NDA9 550 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 CD8B2A6NJW9 211 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 KRBOX1C9JBD0 128 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 RFXAPO00287 272 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 RNF13O43567 381 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 PRKRAO75569 313 aaKnown RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 CD8BP10966 210 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 NUP62P37198 522 aaPredicted RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 INPP1P49441 399 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 ANXA11P50995 505 aaKnown RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 ATP12AP54707 1039 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 SHC2P98077 582 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 FLI1Q01543 452 aaPredicted RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 ST3GAL3Q11203 375 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 FCN2Q15485 313 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 CEBPEQ15744 281 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 ZIC1Q15915 447 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 HNRNPA1L2Q32P51 320 aaKnown RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 TMEM52BQ4KMG9 183 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 HSD17B12Q53GQ0 312 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 CLEC12AQ5QGZ9 265 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 C6orf132Q5T0Z8 1188 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 FAM46CQ5VWP2 391 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 CD276Q5ZPR3 534 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 SMARCD3Q6STE5 483 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 ZNF620Q6ZNG0 422 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 ADGRD2Q7Z7M1 963 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 LRRC28Q86X40 367 aaPredicted RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 NKAIN4Q8IVV8 208 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 SRFBP1Q8NEF9 429 aaKnown RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 PIGXQ8TBF5 258 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 ACOT11Q8WXI4 607 aaPredicted RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 OTULINQ96BN8 352 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 MOAP1Q96BY2 351 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 KCTD12Q96CX2 325 aaKnown RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 ZG16BQ96DA0 208 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 CNRIP1Q96F85 164 aaPredicted RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 WBP1Q96G27 269 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 SCMH1Q96GD3 660 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 C16orf58Q96GQ5 468 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 RBP7Q96R05 134 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 PELOQ9BRX2 385 aaKnown RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 YIPF4Q9BSR8 244 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 WACQ9BTA9 647 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 HINT3Q9NQE9 182 aaKnown RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 RDH8Q9NYR8 311 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 CXXC1Q9P0U4 656 aaPredicted RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 EXTL2Q9UBQ6 330 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 ENTPD4Q9Y227 616 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 PRKAB1Q9Y478 270 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 SIRT4Q9Y6E7 314 aaPredicted RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 IGKV1-8A0A0C4DH67 115 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 A0A0G2JN53 185 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 A0A1W2PPL8 197 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 C4orf51C9J302 202 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 FRS3O43559 492 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 OR1F1O43749 312 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 LZTS3O60299 673 aaPredicted RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 RNGTTO60942 597 aaKnown RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 PTP4A3O75365 173 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 RGS9O75916 674 aaPredicted RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 ZIC2O95409 532 aaPredicted RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 CH25HO95992 272 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 DHFRP00374 187 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 RPN2P04844 631 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 ACSM4P0C7M7 580 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 NTSP30990 170 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 LRRC32Q14392 662 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 FGFBP1Q14512 234 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 ZNF311Q5JNZ3 666 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 PIP5KL1Q5T9C9 394 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 METRNLQ641Q3 311 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 ZNF57Q68EA5 555 aaPredicted RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 ZNF704Q6ZNC4 412 aaPredicted RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 ERN2Q76MJ5 926 aaKnown RBP8.22□□□□□ -1.09
CDH13-202ENST00000428848 SZRD1Q7Z422 152 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 ASPGQ86U10 573 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 OAFQ86UD1 273 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 AMZ2Q86W34 360 aa8.22□□□□□ -1.09
CDH13-202ENST00000428848 VRK2Q86Y07 508 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms