RNA–Protein interactions for RNA: ENST00000428683.5

ZNF3-208, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-208ENST00000428683 HOXB4P17483 251 aaPredicted RBP9.2□□□□□ -0.94
ZNF3-208ENST00000428683 DDX5P17844 614 aaKnown RBP9.2□□□□□ -0.94
ZNF3-208ENST00000428683 ME2P23368 584 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 SHC1P29353 583 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 ADSLP30566 484 aaPredicted RBP9.2□□□□□ -0.94
ZNF3-208ENST00000428683 RPL3P39023 403 aaKnown RBP9.2□□□□□ -0.94
ZNF3-208ENST00000428683 PCYT1AP49585 367 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 OCRLQ01968 901 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 ZNF117Q03924 483 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 FGFBP1Q14512 234 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 TOMM34Q15785 309 aaPredicted RBP9.2□□□□□ -0.94
ZNF3-208ENST00000428683 ACKR1Q16570 336 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 CTU2Q2VPK5 515 aaKnown RBP9.2□□□□□ -0.94
ZNF3-208ENST00000428683 PGS1Q32NB8 556 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 NDUFAF6Q330K2 333 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 LSM12Q3MHD2 195 aaKnown RBP9.2□□□□□ -0.94
ZNF3-208ENST00000428683 XKR7Q5GH72 579 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 EXOSC6Q5RKV6 272 aaKnown RBP9.2□□□□□ -0.94
ZNF3-208ENST00000428683 PDSS1Q5T2R2 415 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 CDC73Q6P1J9 531 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 CBLN3Q6UW01 205 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 ESPNLQ6ZVH7 1005 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 KRTAP1-3Q8IUG1 177 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 MISPQ8IVT2 679 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 HOMEZQ8IX15 550 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 CLEC4FQ8N1N0 589 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 ZNF614Q8N883 585 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 OR6K3Q8NGY3 331 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 OR5AK3PQ8NH89 298 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 FBXO27Q8NI29 283 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 PPP1R14CQ8TAE6 165 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 TUBGCP3Q96CW5 907 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 GMPPAQ96IJ6 420 aaPredicted RBP9.2□□□□□ -0.94
ZNF3-208ENST00000428683 C18orf12Q96KH6 178 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 PPP1R36Q96LQ0 422 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 KLHL15Q96M94 604 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 STACQ99469 402 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 PRPF18Q99633 342 aaKnown RBP9.2□□□□□ -0.94
ZNF3-208ENST00000428683 ACTRT3Q9BYD9 372 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 ROPN1BQ9BZX4 212 aaPredicted RBP9.2□□□□□ -0.94
ZNF3-208ENST00000428683 ZNF395Q9H8N7 513 aaPredicted RBP9.2□□□□□ -0.94
ZNF3-208ENST00000428683 ROPN1Q9HAT0 212 aaPredicted RBP9.2□□□□□ -0.94
ZNF3-208ENST00000428683 DUSP22Q9NRW4 184 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 PAQR5Q9NXK6 330 aaPredicted RBP9.2□□□□□ -0.94
ZNF3-208ENST00000428683 LGALS13Q9UHV8 139 aa9.2□□□□□ -0.94
ZNF3-208ENST00000428683 FAF1Q9UNN5 650 aaPredicted RBP9.2□□□□□ -0.94
ZNF3-208ENST00000428683 A0A1W2PQD3 144 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 ZNF195O14628 629 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 ARHGEF9O43307 516 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 ITM2AO43736 263 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 SS18L1O75177 396 aaPredicted RBP9.19□□□□□ -0.94
ZNF3-208ENST00000428683 HSPA4LO95757 839 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 THBDP07204 575 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 BPGMP07738 259 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 INHBBP09529 407 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 G6PDP11413 515 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 LCN1P31025 176 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 SOAT1P35610 550 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 P2RX1P51575 399 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 CASP9P55211 416 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 FOXF1Q12946 379 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 TMEM176BQ3YBM2 270 aaPredicted RBP9.19□□□□□ -0.94
ZNF3-208ENST00000428683 KLHL26Q53HC5 615 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 DCST2Q5T1A1 773 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.19□□□□□ -0.94
ZNF3-208ENST00000428683 SHEQ5VZ18 495 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 STAC2Q6ZMT1 411 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 OLIG3Q7RTU3 272 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 WFDC8Q8IUA0 241 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 NUDCD3Q8IVD9 361 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 OR56A1Q8NGH5 318 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 OR5D16Q8NGK9 328 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 PIGTQ969N2 578 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 COQ8BQ96D53 544 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 PERPQ96FX8 193 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 REXO5Q96IC2 774 aaKnown RBP9.19□□□□□ -0.94
ZNF3-208ENST00000428683 PKNOX2Q96KN3 472 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 OR7D2Q96RA2 312 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 CCL19Q99731 98 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 DUSP26Q9BV47 211 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 HOXD1Q9GZZ0 328 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 HHATLQ9HCP6 504 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 ATAD3AQ9NVI7 634 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 GPATCH2Q9NW75 528 aa9.19□□□□□ -0.94
ZNF3-208ENST00000428683 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.19□□□□□ -0.94
ZNF3-208ENST00000428683 V9GYY5 206 aaPredicted RBP9.19□□□□□ -0.94
ZNF3-208ENST00000428683 ZNF469Q96JG9 3925 aaPredicted RBP9.18□□□□□ -0.94
ZNF3-208ENST00000428683 C7orf72A4D263 438 aa9.18□□□□□ -0.94
ZNF3-208ENST00000428683 H3BNH8 94 aa9.18□□□□□ -0.94
ZNF3-208ENST00000428683 SMAD7O15105 426 aaKnown RBP9.18□□□□□ -0.94
ZNF3-208ENST00000428683 KLF4O43474 513 aa9.18□□□□□ -0.94
ZNF3-208ENST00000428683 TYROBPO43914 113 aa9.18□□□□□ -0.94
ZNF3-208ENST00000428683 CYP7B1O75881 506 aa9.18□□□□□ -0.94
ZNF3-208ENST00000428683 PLAUP00749 431 aa9.18□□□□□ -0.94
ZNF3-208ENST00000428683 TUBBP07437 444 aa9.18□□□□□ -0.94
ZNF3-208ENST00000428683 FPR1P21462 350 aa9.18□□□□□ -0.94
ZNF3-208ENST00000428683 MATN1P21941 496 aa9.18□□□□□ -0.94
ZNF3-208ENST00000428683 LOXP28300 417 aaPredicted RBP9.18□□□□□ -0.94
ZNF3-208ENST00000428683 EIF1P41567 113 aaKnown RBP9.18□□□□□ -0.94
ZNF3-208ENST00000428683 ATP12AP54707 1039 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms