RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 SMPD2O60906 423 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 SLU7O95391 586 aaKnown RBP13.86□□□□□ -0.19
SEC13-210ENST00000428626 NTN1O95631 604 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 C6orf47O95873 294 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 CHEK2O96017 543 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 LCN1P31025 176 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 C6orf136Q5SQH8 315 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 HBMQ6B0K9 141 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 ESPNLQ6ZVH7 1005 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 LRRC75A-AS1Q8N1F1 130 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 PSMA8Q8TAA3 256 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 TCP10LQ8TDR4 215 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 ROBO4Q8WZ75 1007 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 OSTF1Q92882 214 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 ARSGQ96EG1 525 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 COX4I2Q96KJ9 171 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 STACQ99469 402 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 CCL19Q99731 98 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 PIGUQ9H490 435 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 ICAM5Q9UMF0 924 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 EMC9Q9Y3B6 208 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 SNX8Q9Y5X2 465 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 CADP27708 2225 aa13.86□□□□□ -0.19
SEC13-210ENST00000428626 NPIPB9F8W1W9 429 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 H7C1Q1 480 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 SCDO00767 359 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 LY6G6DO95868 133 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 PLGP00747 810 aaPredicted RBP13.85□□□□□ -0.19
SEC13-210ENST00000428626 AGTR1P30556 359 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 ADSLP30566 484 aaPredicted RBP13.85□□□□□ -0.19
SEC13-210ENST00000428626 SFTPDP35247 375 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 HPCAL1P37235 193 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 SERPINB4P48594 390 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 ZNF41P51814 821 aaPredicted RBP13.85□□□□□ -0.19
SEC13-210ENST00000428626 CTBP2P56545 445 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 ZNF844Q08AG5 666 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 KLHL26Q53HC5 615 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 IL23RQ5VWK5 629 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 CDC73Q6P1J9 531 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 LRIG3Q6UXM1 1119 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 CLEC9AQ6UXN8 241 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 R3HCC1LQ7Z5L2 792 aaKnown RBP13.85□□□□□ -0.19
SEC13-210ENST00000428626 P3H2Q8IVL5 708 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 RIMKLAQ8IXN7 391 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 LILRA2Q8N149 483 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 ABHD3Q8WU67 409 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 CAVIN3Q969G5 261 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 PIGTQ969N2 578 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 COQ8BQ96D53 544 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 PERPQ96FX8 193 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 PPP3R2Q96LZ3 170 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 KLHL15Q96M94 604 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 Q96MF0 132 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 IQCGQ9H095 443 aaKnown RBP13.85□□□□□ -0.19
SEC13-210ENST00000428626 SERHL2Q9H4I8 314 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 C12orf49Q9H741 205 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 COQ10BQ9H8M1 238 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 LGALS13Q9UHV8 139 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 MCTS1Q9ULC4 181 aaKnown RBP13.85□□□□□ -0.19
SEC13-210ENST00000428626 CARD8Q9Y2G2 431 aa13.85□□□□□ -0.19
SEC13-210ENST00000428626 TRIM64A6NGJ6 449 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 TRIM64BA6NI03 449 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 SKAP2O75563 359 aaPredicted RBP13.84□□□□□ -0.19
SEC13-210ENST00000428626 SYNGR4O95473 234 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 NUDT17P0C025 328 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 HPGDP15428 266 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 CCT3P49368 545 aaKnown RBP13.84□□□□□ -0.19
SEC13-210ENST00000428626 VSNL1P62760 191 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 TP53BP2Q13625 1128 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 TSC22D1Q15714 1073 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 ZNF239Q16600 458 aaKnown RBP13.84□□□□□ -0.19
SEC13-210ENST00000428626 DCST2Q5T1A1 773 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 OLIG3Q7RTU3 272 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 NUFIP2Q7Z417 695 aaKnown RBP13.84□□□□□ -0.19
SEC13-210ENST00000428626 YTHDF3Q7Z739 585 aaKnown RBP13.84□□□□□ -0.19
SEC13-210ENST00000428626 LSRQ86X29 649 aaPredicted RBP13.84□□□□□ -0.19
SEC13-210ENST00000428626 MISPQ8IVT2 679 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 OR5AK3PQ8NH89 298 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 FBXO27Q8NI29 283 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 PHOSPHO1Q8TCT1 267 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 RNF128Q8TEB7 428 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 OR5P2Q8WZ92 322 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 CHMP6Q96FZ7 201 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 ACTRT3Q9BYD9 372 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 ZNF395Q9H8N7 513 aaPredicted RBP13.84□□□□□ -0.19
SEC13-210ENST00000428626 PAQR5Q9NXK6 330 aaPredicted RBP13.84□□□□□ -0.19
SEC13-210ENST00000428626 KCNE5Q9UJ90 142 aa13.84□□□□□ -0.19
SEC13-210ENST00000428626 CENPVL1A0A0U1RR11 272 aa13.83□□□□□ -0.2
SEC13-210ENST00000428626 ESPNB1AK53 854 aa13.83□□□□□ -0.2
SEC13-210ENST00000428626 TMEM114B3SHH9 223 aa13.83□□□□□ -0.2
SEC13-210ENST00000428626 ARHGEF9O43307 516 aa13.83□□□□□ -0.2
SEC13-210ENST00000428626 GCM2O75603 506 aaPredicted RBP13.83□□□□□ -0.2
SEC13-210ENST00000428626 HEXAP06865 529 aa13.83□□□□□ -0.2
SEC13-210ENST00000428626 FPR1P21462 350 aa13.83□□□□□ -0.2
SEC13-210ENST00000428626 ETV4P43268 484 aa13.83□□□□□ -0.2
SEC13-210ENST00000428626 CARD18P57730 90 aa13.83□□□□□ -0.2
SEC13-210ENST00000428626 RPS26P62854 115 aaKnown RBP13.83□□□□□ -0.2
SEC13-210ENST00000428626 ATP6AP1LQ52LC2 224 aa13.83□□□□□ -0.2
SEC13-210ENST00000428626 BEX5Q5H9J7 111 aa13.83□□□□□ -0.2
SEC13-210ENST00000428626 ZNF704Q6ZNC4 412 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms