RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 IFT88Q13099 833 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 ACAP2Q15057 778 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 ZSWIM7Q19AV6 140 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 TECRLQ5HYJ1 363 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 GRTP1Q5TC63 336 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 GTF2IRD2BQ6EKJ0 949 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 FCRLAQ7L513 359 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 GTF2IRD2Q86UP8 949 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 TRABD2AQ86V40 505 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 FAM9CQ8IZT9 166 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 LILRA2Q8N149 483 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 FBXL14Q8N1E6 418 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 PLD6Q8N2A8 252 aaKnown RBP7.07□□□□□ -1.28
CSTF1-203ENST00000428552 OR2L13Q8N349 312 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 ZNF433Q8N7K0 673 aaPredicted RBP7.07□□□□□ -1.28
CSTF1-203ENST00000428552 CELF2-AS1Q8N7Q2 184 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 PTGR2Q8N8N7 351 aaPredicted RBP7.07□□□□□ -1.28
CSTF1-203ENST00000428552 GATSQ8NAP1 163 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 SGMS2Q8NHU3 365 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 ACTRT2Q8TDY3 377 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 CPNE4Q96A23 557 aaPredicted RBP7.07□□□□□ -1.28
CSTF1-203ENST00000428552 C3orf49Q96BT1 292 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 RADILQ96JH8 1075 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 FOXN4Q96NZ1 517 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 SORCS2Q96PQ0 1159 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 FAIM2Q9BWQ8 316 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 TBL1XR1Q9BZK7 514 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 TRIM31Q9BZY9 425 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 C12orf65Q9H3J6 166 aaKnown RBP7.07□□□□□ -1.28
CSTF1-203ENST00000428552 BRF2Q9HAW0 419 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 PFDN4Q9NQP4 134 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 CPSF2Q9P2I0 782 aaKnown RBP7.07□□□□□ -1.28
CSTF1-203ENST00000428552 SNX12Q9UMY4 172 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 PPP2R2CQ9Y2T4 447 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 TNPO3Q9Y5L0 923 aaKnown RBP7.07□□□□□ -1.28
CSTF1-203ENST00000428552 SLC25A15Q9Y619 301 aa7.07□□□□□ -1.28
CSTF1-203ENST00000428552 ARFGEF3Q5TH69 2177 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 IGHV3-15A0A0B4J1V0 119 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 A0A1W2PR80 420 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 TMEM89A2RUT3 159 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 LRP5LA4QPB2 252 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 C9JVG2 144 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 NDUFS8O00217 210 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 OIP5O43482 229 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 RGS14O43566 566 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 COQ9O75208 318 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 PRKD3O94806 890 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 KLHL2O95198 593 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 JUNP05412 331 aaKnown RBP7.06□□□□□ -1.28
CSTF1-203ENST00000428552 NGFRP08138 427 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 RPS17P08708 135 aaKnown RBP7.06□□□□□ -1.28
CSTF1-203ENST00000428552 PABPC4LP0CB38 370 aaKnown RBP7.06□□□□□ -1.28
CSTF1-203ENST00000428552 ZNF23P17027 643 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 TSPAN8P19075 237 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 GGT1P19440 569 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 PTAFRP25105 342 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 RFX3P48380 749 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 PRIM2P49643 509 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 ZNF83P51522 516 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 FOXG1P55316 489 aaPredicted RBP7.06□□□□□ -1.28
CSTF1-203ENST00000428552 DR1Q01658 176 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 FOXF1Q12946 379 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 TRADDQ15628 312 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 CD226Q15762 336 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 PRR31Q5SQ13 230 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 TTC19Q6DKK2 380 aaPredicted RBP7.06□□□□□ -1.28
CSTF1-203ENST00000428552 ZNF544Q6NX49 715 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 SLC22A25Q6T423 547 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 TMEM107Q6UX40 140 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 TMEM108Q6UXF1 575 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 P2RY8Q86VZ1 359 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 KLHL7Q8IXQ5 586 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 SLC35F6Q8N357 371 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.06□□□□□ -1.282e-7■■□□□ 13
CSTF1-203ENST00000428552 C16orf78Q8WTQ4 265 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 PYROXD1Q8WU10 500 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 ZFAND2BQ8WV99 257 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 SELENOMQ8WWX9 145 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 PIK3R3Q92569 461 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 CDKL2Q92772 493 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 ZNF775Q96BV0 537 aaPredicted RBP7.06□□□□□ -1.28
CSTF1-203ENST00000428552 ZMYND19Q96E35 227 aaPredicted RBP7.06□□□□□ -1.28
CSTF1-203ENST00000428552 PHF21BQ96EK2 531 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 MPP4Q96JB8 637 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 ZNF300Q96RE9 604 aaPredicted RBP7.06□□□□□ -1.28
CSTF1-203ENST00000428552 OCSTAMPQ9BR26 566 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 RSRP1Q9BUV0 290 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 BPESC1Q9GZL8 116 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 ELOVL6Q9H5J4 265 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 OCEL1Q9H607 264 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 Q9N2J8 555 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 TXNDC16Q9P2K2 825 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 STOML1Q9UBI4 398 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 MGAT4BQ9UQ53 548 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 SNX24Q9Y343 169 aa7.06□□□□□ -1.28
CSTF1-203ENST00000428552 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.06□□□□□ -1.28
CSTF1-203ENST00000428552 STX16-NPEPL1H3BU86 382 aa7.05□□□□□ -1.28
CSTF1-203ENST00000428552 STX16O14662 325 aa7.05□□□□□ -1.28
CSTF1-203ENST00000428552 PCDH7O60245 1069 aa7.05□□□□□ -1.28
CSTF1-203ENST00000428552 ESRRBO95718 433 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms