RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 NUF2Q9BZD4 464 aa16.52■□□□□ 0.24
PSPC1-202ENST00000427943 PRRG4Q9BZD6 226 aa16.52■□□□□ 0.24
PSPC1-202ENST00000427943 STOML1Q9UBI4 398 aa16.52■□□□□ 0.24
PSPC1-202ENST00000427943 CLEC4AQ9UMR7 237 aa16.52■□□□□ 0.24
PSPC1-202ENST00000427943 CARD8Q9Y2G2 431 aa16.52■□□□□ 0.24
PSPC1-202ENST00000427943 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.52■□□□□ 0.24
PSPC1-202ENST00000427943 TESMINQ9Y4I5 508 aa16.52■□□□□ 0.24
PSPC1-202ENST00000427943 RNF103-CHMP3A0A140T963 221 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 C7orf72A4D263 438 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 ESPNB1AK53 854 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 TNFSF11O14788 317 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 NUDT14O95848 222 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 CGAP01215 116 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 HRGP04196 525 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 LINGO3P0C6S8 592 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 IL11P20809 199 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 DNASE1P24855 282 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 CCKARP32238 428 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 CD79BP40259 229 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 CASP9P55211 416 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 STX3Q13277 289 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 GUSBP1Q15486 140 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 KLHL26Q53HC5 615 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 PAMR1Q6UXH9 720 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 OLIG3Q7RTU3 272 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 ANKRD46Q86W74 232 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 ZNF610Q8N9Z0 462 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 OR4A15Q8NGL6 344 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 DPY30Q9C005 99 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 PNPOQ9NVS9 261 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 ACTL7BQ9Y614 415 aa16.51■□□□□ 0.23
PSPC1-202ENST00000427943 UQCRHLA0A096LP55 91 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 A0A0J9YW62 118 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 A0A1W2PPR1 153 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 POU2F1P14859 743 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 MATN1P21941 496 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 ME2P23368 584 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 SHC1P29353 583 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 SFTPDP35247 375 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 KCNJ5P48544 419 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 P2RX1P51575 399 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 ATP12AP54707 1039 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 RAC1P63000 192 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 OCRLQ01968 901 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 BST1Q10588 318 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 BHLHB9Q6PI77 547 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 FAM214BQ7L5A3 538 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 C6orf120Q7Z4R8 191 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 MTERF4Q7Z6M4 381 aaKnown RBP16.5■□□□□ 0.23
PSPC1-202ENST00000427943 TMCO5AQ8N6Q1 288 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 OR2V1Q8NHB1 315 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 RFWD2Q8NHY2 731 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 FOXC2Q99958 501 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 HOXD1Q9GZZ0 328 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 KLHL28Q9NXS3 571 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 NDRG3Q9UGV2 375 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 HAO1Q9UJM8 370 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 MCTS1Q9ULC4 181 aaKnown RBP16.5■□□□□ 0.23
PSPC1-202ENST00000427943 PROCRQ9UNN8 238 aa16.5■□□□□ 0.23
PSPC1-202ENST00000427943 MAP1AP78559 2803 aaPredicted RBP16.5■□□□□ 0.23
PSPC1-202ENST00000427943 NPIPB9F8W1W9 429 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 H3BNH8 94 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 GTPBP1O00178 669 aaKnown RBP16.49■□□□□ 0.23
PSPC1-202ENST00000427943 RNASET2O00584 256 aaKnown RBP16.49■□□□□ 0.23
PSPC1-202ENST00000427943 CASKO14936 926 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 SNUPNO95149 360 aaKnown RBP16.49■□□□□ 0.23
PSPC1-202ENST00000427943 GOSR1O95249 250 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 SYNGR4O95473 234 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 PLGP00747 810 aaPredicted RBP16.49■□□□□ 0.23
PSPC1-202ENST00000427943 CD8BP10966 210 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 TOMM34Q15785 309 aaPredicted RBP16.49■□□□□ 0.23
PSPC1-202ENST00000427943 EXOC3L2Q2M3D2 409 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 PDZK1Q5T2W1 519 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 HHATQ5VTY9 493 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 HBMQ6B0K9 141 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 ESPNLQ6ZVH7 1005 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 MGARPQ8TDB4 240 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 ARSGQ96EG1 525 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 KLHL15Q96M94 604 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 WFIKKN1Q96NZ8 548 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 SDF2Q99470 211 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 CXXC4Q9H2H0 198 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 PLEKHF2Q9H8W4 249 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 C6orf203Q9P0P8 240 aaPredicted RBP16.49■□□□□ 0.23
PSPC1-202ENST00000427943 ICAM5Q9UMF0 924 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 EMC9Q9Y3B6 208 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 DTNAQ9Y4J8 743 aa16.49■□□□□ 0.23
PSPC1-202ENST00000427943 CENPVL1A0A0U1RR11 272 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 ANKRD28O15084 1053 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 ADAMDEC1O15204 470 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 CPSF4O95639 269 aaKnown RBP16.48■□□□□ 0.23
PSPC1-202ENST00000427943 RAF1P04049 648 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 LBPP18428 481 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 UGT2B10P36537 528 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 CCR4P51679 360 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 CTBP2P56545 445 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 NME5P56597 212 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 PHC1P78364 1004 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 FGFBP1Q14512 234 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 GPR68Q15743 365 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms