RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 KIAA0513O60268 411 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 JRKO75564 520 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 SEC14L2O76054 403 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 GPR75O95800 540 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 ADORA3P0DMS8 318 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 MC3RP41968 323 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 MAB21L1Q13394 359 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 MAPK14Q16539 360 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 SGCAQ16586 387 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 XKR7Q5GH72 579 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 C16orf78Q8WTQ4 265 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 DEDD2Q8WXF8 326 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 IL1RAPQ9NPH3 570 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 SCN10AQ9Y5Y9 1956 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 OR7A10O76100 309 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 POU3F2P20265 443 aaPredicted RBP9.96□□□□□ -0.82
TCOF1-204ENST00000427724 CDKN2CP42773 168 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 GPR3P46089 330 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 TAS2R38P59533 333 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 ZNF691Q5VV52 312 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 GTF2IRD2BQ6EKJ0 949 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 TECPR1Q7Z6L1 1165 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 B3GNT8Q7Z7M8 397 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 GTF2IRD2Q86UP8 949 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 ZSWIM9Q86XI8 627 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 LIX1LQ8IVB5 337 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 NAGSQ8N159 534 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 FGF11Q92914 225 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 DUS3LQ96G46 650 aaKnown RBP9.96□□□□□ -0.82
TCOF1-204ENST00000427724 LOXL4Q96JB6 756 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 IP6K3Q96PC2 410 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 TBX5Q99593 518 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 NRSN2Q9GZP1 204 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 CLMPQ9H6B4 373 aa9.96□□□□□ -0.82
TCOF1-204ENST00000427724 GDF9O60383 454 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 STX11O75558 287 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 CDRT1O95170 752 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 RENP00797 406 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 ADPRMQ3LIE5 342 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 TMEM201Q5SNT2 666 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 MZT2AQ6P582 158 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 PRSS48Q7RTY5 328 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 NOXA1Q86UR1 476 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 TCEANCQ8N8B7 351 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 KIAA1958Q8N8K9 716 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 OR56A3Q8NH54 315 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 SLC35B4Q969S0 331 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 MGLLQ99685 303 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 ANKRA2Q9H9E1 313 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 PDFQ9HBH1 243 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 C14orf105Q9NVL8 296 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 ZNF891A8MT65 544 aaPredicted RBP9.95□□□□□ -0.82
TCOF1-204ENST00000427724 SLC30A4O14863 429 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 PPM1DO15297 605 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 TLX2O43763 284 aaPredicted RBP9.95□□□□□ -0.82
TCOF1-204ENST00000427724 SDC2P34741 201 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 GNALP38405 381 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 ATP12AP54707 1039 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 CBLBQ13191 982 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 MAD2L1BPQ15013 274 aaPredicted RBP9.95□□□□□ -0.82
TCOF1-204ENST00000427724 ZNF630Q2M218 657 aaPredicted RBP9.95□□□□□ -0.82
TCOF1-204ENST00000427724 REEP3Q6NUK4 255 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 ZNF550Q7Z398 422 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 NRARPQ7Z6K4 114 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 NAXEQ8NCW5 288 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 TOR1AIP2Q8NFQ8 470 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 C9orf43Q8TAL5 461 aaPredicted RBP9.95□□□□□ -0.82
TCOF1-204ENST00000427724 UBE2FQ969M7 185 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 OR5B2Q96R09 309 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 AMBRA1Q9C0C7 1298 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 IKZF5Q9H5V7 419 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 COL11A1P12107 1806 aaPredicted RBP9.95□□□□□ -0.82
TCOF1-204ENST00000427724 ACACBO00763 2458 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 SBF1O95248 1867 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 PEX11BO96011 259 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 NUDT7P0C024 238 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 CCL4P13236 92 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 MAOAP21397 527 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 CA5AP35218 305 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 AHRP35869 848 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 PCBP4P57723 403 aaKnown RBP9.95□□□□□ -0.82
TCOF1-204ENST00000427724 UGT8Q16880 541 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 CPZQ66K79 652 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 LSM14AQ8ND56 463 aaKnown RBP9.95□□□□□ -0.82
TCOF1-204ENST00000427724 OR9Q2Q8NGE9 314 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 ZNF431Q8TF32 576 aaPredicted RBP9.95□□□□□ -0.82
TCOF1-204ENST00000427724 OR51I1Q9H343 314 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 DMRT3Q9NQL9 472 aa9.95□□□□□ -0.82
TCOF1-204ENST00000427724 TDRD6O60522 2096 aaKnown RBP9.95□□□□□ -0.82
TCOF1-204ENST00000427724 LAMA2P24043 3122 aaKnown RBP9.95□□□□□ -0.82
TCOF1-204ENST00000427724 RGPD3A6NKT7 1758 aaPredicted RBP9.94□□□□□ -0.82
TCOF1-204ENST00000427724 CCDC163A0A0D9SF12 145 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 EIF1AYO14602 144 aaKnown RBP9.94□□□□□ -0.82
TCOF1-204ENST00000427724 RFC3P40938 356 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 VLDLRP98155 873 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 AKIRIN2Q53H80 203 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 PARP16Q8N5Y8 322 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 PAPD5Q8NDF8 572 aaKnown RBP9.94□□□□□ -0.82
TCOF1-204ENST00000427724 OR52R1Q8NGF1 315 aa9.94□□□□□ -0.82
TCOF1-204ENST00000427724 OR5T3Q8NGG3 340 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms