RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 PRAMEF27A3QJZ7 478 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 LINC01387J3KSC0 135 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 FCMRO60667 390 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 OPN1LWP04000 364 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 SHC1P29353 583 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 CDKN2CP42773 168 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 SLC6A8P48029 635 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 CLNS1AP54105 237 aaKnown RBP17.23■□□□□ 0.35
COL9A2-204ENST00000427563 GUSBP1Q15486 140 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 TOMM34Q15785 309 aaPredicted RBP17.23■□□□□ 0.35
COL9A2-204ENST00000427563 FLYWCH1Q4VC44 716 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 ATG16L1Q676U5 607 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 HEPHL1Q6MZM0 1159 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 VWA1Q6PCB0 445 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 SPATA19Q7Z5L4 167 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 MEIOBQ8N635 442 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 FNDC9Q8TBE3 224 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 PHOSPHO1Q8TCT1 267 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 ZNF75CPQ92670 426 aaPredicted RBP17.23■□□□□ 0.35
COL9A2-204ENST00000427563 ARSGQ96EG1 525 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 MARK4Q96L34 752 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 CCDC115Q96NT0 180 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 OR52B2Q96RD2 323 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 INPP5KQ9BT40 448 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 CARD8Q9Y2G2 431 aa17.23■□□□□ 0.35
COL9A2-204ENST00000427563 ANKRD17O75179 2603 aaKnown RBP17.23■□□□□ 0.35
COL9A2-204ENST00000427563 SPG11Q96JI7 2443 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 FAM221AA4D161 298 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 SLC22A20A6NK97 555 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 KLF11O14901 512 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 AQP8O94778 261 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 HPGDP15428 266 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 ATP6V1C1P21283 382 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 UQCRC2P22695 453 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 S100A3P33764 101 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 KIR2DL2P43627 348 aaPredicted RBP17.22■□□□□ 0.35
COL9A2-204ENST00000427563 KIR2DL3P43628 341 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 FOXF1Q12946 379 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 PON3Q15166 354 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 ARHGAP11BQ3KRB8 267 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 ANXA8L1Q5VT79 327 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 TNFAIP8L2Q6P589 184 aaPredicted RBP17.22■□□□□ 0.35
COL9A2-204ENST00000427563 MTERF4Q7Z6M4 381 aaKnown RBP17.22■□□□□ 0.35
COL9A2-204ENST00000427563 LUZP2Q86TE4 346 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 NRGNQ92686 78 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 RAB8BQ92930 207 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 STARD4Q96DR4 205 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 NEURL3Q96EH8 262 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 ZNF350Q9GZX5 532 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 RNF122Q9H9V4 155 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 BTNL2Q9UIR0 455 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 DTNAQ9Y4J8 743 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 CCDC168Q8NDH2 2452 aa17.22■□□□□ 0.35
COL9A2-204ENST00000427563 TRPC5OSA6NMA1 111 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 BCAS1O75363 584 aaPredicted RBP17.21■□□□□ 0.35
COL9A2-204ENST00000427563 OR12D1P0DN82 309 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 PLAURQ03405 335 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 MAPK14Q16539 360 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 DPY19L1Q2PZI1 675 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 PDZK1Q5T2W1 519 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 BHLHB9Q6PI77 547 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 BTLAQ7Z6A9 289 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 LINC01560Q8TB33 94 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 GPR119Q8TDV5 335 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 ZBTB8AQ96BR9 441 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 NMUR2Q9GZQ4 415 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 HOXD1Q9GZZ0 328 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 TMEM185BQ9H7F4 350 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 SLC6A13Q9NSD5 602 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 INTS9Q9NV88 658 aaKnown RBP17.21■□□□□ 0.35
COL9A2-204ENST00000427563 GALNT8Q9NY28 637 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 FOXD3Q9UJU5 478 aaPredicted RBP17.21■□□□□ 0.35
COL9A2-204ENST00000427563 MKLN1Q9UL63 735 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 ZNF175Q9Y473 711 aa17.21■□□□□ 0.35
COL9A2-204ENST00000427563 A0A0J9YW62 118 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 A8MXE2 369 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 EIF1AYO14602 144 aaKnown RBP17.2■□□□□ 0.34
COL9A2-204ENST00000427563 CTAG2O75638 210 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 UGT2B17O75795 530 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 SOX30O94993 753 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 CGAP01215 116 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 PGRP06401 933 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 NID1P14543 1247 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 CAPN3P20807 821 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 P2RX1P51575 399 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 RAC1P63000 192 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 GPR68Q15743 365 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 ZNF141Q15928 474 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 AP1ARQ63HQ0 302 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 P4HA3Q7Z4N8 544 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 LSRQ86X29 649 aaPredicted RBP17.2■□□□□ 0.34
COL9A2-204ENST00000427563 ARFGAP2Q8N6H7 521 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 OR10D3Q8NH80 312 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 PIWIL2Q8TC59 973 aaKnown RBP17.2■□□□□ 0.34
COL9A2-204ENST00000427563 GPATCH1Q9BRR8 931 aaKnown RBP17.2■□□□□ 0.34
COL9A2-204ENST00000427563 SLC35A5Q9BS91 424 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 RBM24Q9BX46 236 aaKnown RBP17.2■□□□□ 0.34
COL9A2-204ENST00000427563 PCDHGB4Q9UN71 923 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 AKAP6Q13023 2319 aa17.2■□□□□ 0.34
COL9A2-204ENST00000427563 DUXAA6NLW8 204 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms