RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 ZG16BQ96DA0 208 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 PEX11GQ96HA9 241 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 CFHR5Q9BXR6 569 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 MTG2Q9H4K7 406 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 BABAM2Q9NXR7 383 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 NDOR1Q9UHB4 597 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 OR6C68A6NDL8 312 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 DISC1C4P0D8 188 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 J3QLW9 94 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 B4GALT2O60909 372 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 SNAPC5O75971 98 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 GYPBP06028 91 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 ZNF35P13682 527 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 ZNF19P17023 458 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 PRKAR1BP31321 381 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 RFX3P48380 749 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 PRKCZQ05513 592 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 SMAD2Q15796 467 aaKnown RBP10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 PYHIN1Q6K0P9 492 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 HEPHL1Q6MZM0 1159 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 ZNF322Q6U7Q0 402 aaPredicted RBP10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 IL17RCQ8NAC3 791 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 ZNF671Q8TAW3 534 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 WFDC5Q8TCV5 224 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 APOBEC4Q8WW27 367 aaKnown RBP10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 SCLYQ96I15 445 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 TSNAXQ99598 290 aaKnown RBP10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 HCAR1Q9BXC0 346 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 SLC12A9Q9BXP2 914 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 NOX3Q9HBY0 568 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 NIT2Q9NQR4 276 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 PCOLCE2Q9UKZ9 415 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 SLC6A5Q9Y345 797 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 A0A0G2JPF8 293 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 MEIS3P1A6NDR6 274 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 HNRNPCL3B7ZW38 293 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 H3BNC9 293 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 PRICKLE3O43900 615 aaPredicted RBP10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 EFCAB14O75071 495 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 RLN1P04808 185 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 FURINP09958 794 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 HNRNPCL4P0DMR1 293 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 GABRA1P14867 456 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 DCTDP32321 178 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 OR1G1P47890 313 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 MANFP55145 182 aaKnown RBP10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 SEC61A1P61619 476 aaKnown RBP10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 SNRPEP62304 92 aaKnown RBP10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 PUSL1Q8N0Z8 303 aaKnown RBP10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 TMEM185AQ8NFB2 350 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 OR52I2Q8NH67 350 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 MYLIPQ8WY64 445 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 EXOSC8Q96B26 276 aaKnown RBP10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 BRD9Q9H8M2 597 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 MAN2C1Q9NTJ4 1040 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 MBD2Q9UBB5 411 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 MOKQ9UQ07 419 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 TDRD15B5MCY1 1934 aaKnown RBP10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 A0A087WUU8 490 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 PRAMEF27A3QJZ7 478 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 GLOD5A6NK44 160 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 NARSO43776 548 aaKnown RBP10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 RGS9O75916 674 aaPredicted RBP10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 IFNA4P05014 189 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 GAAP10253 952 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 CLUP10909 449 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 SYN1P17600 705 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 PVALBP20472 110 aaPredicted RBP10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 PRPH2P23942 346 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 CDK5Q00535 292 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 SORDQ00796 357 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 ZNF763Q0D2J5 394 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 GK2Q14410 553 aaPredicted RBP10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 LINC00303Q3SY05 128 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 HES5Q5TA89 166 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 OR7E24Q6IFN5 339 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 C11orf88Q6PI97 169 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 AGTRAPQ6RW13 159 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 FGD2Q7Z6J4 655 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 CPXM2Q8N436 756 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 OR4Q3Q8NH05 313 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 RELTQ969Z4 430 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 SGK3Q96BR1 496 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 PPP1R16AQ96I34 528 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 SPATA5L1Q9BVQ7 753 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 OR51V1Q9H2C8 321 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 TMEM38AQ9H6F2 299 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 BIN3Q9NQY0 253 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 DHCR7Q9UBM7 475 aaKnown RBP10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 SCN10AQ9Y5Y9 1956 aa10.53□□□□□ -0.72
SEC61A1-202ENST00000424880 ARRDC5A6NEK1 342 aa10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 KHDRBS3O75525 346 aaKnown RBP10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 ACAA1P09110 424 aaPredicted RBP10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 NFYBP25208 207 aa10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 CCND3P30281 292 aaPredicted RBP10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 RAG2P55895 527 aa10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 GGTA1PQ4G0N0 100 aa10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 STPG1Q5TH74 334 aa10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 LDLRAD3Q86YD5 345 aa10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 CAMKVQ8NCB2 501 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms