RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 FAM156AQ8NDB6 213 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 TNIP2Q8NFZ5 429 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 OR2M3Q8NG83 312 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 TAMM41Q96BW9 452 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 GNRHR2Q96P88 292 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 BTBD10Q9BSF8 475 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 RSPO3Q9BXY4 272 aaPredicted RBP15.48■□□□□ 0.07
COL7A1-202ENST00000422991 UBQLN3Q9H347 655 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 B4GALT7Q9UBV7 327 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 FBXL2Q9UKC9 423 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 CARD8Q9Y2G2 431 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 CDHR4A6H8M9 788 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 J3QKU1 62 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 ACOT7O00154 380 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 GTPBP1O00178 669 aaKnown RBP15.47■□□□□ 0.07
COL7A1-202ENST00000422991 CXCR6O00574 342 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 ZNF264O43296 627 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 HCRTR2O43614 444 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 EIF4E2O60573 245 aaKnown RBP15.47■□□□□ 0.07
COL7A1-202ENST00000422991 SERPINB7O75635 380 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 MFN2O95140 757 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 CRYABP02511 175 aaKnown RBP15.47■□□□□ 0.07
COL7A1-202ENST00000422991 GGT1P19440 569 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 MSX1P28360 303 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 PRKAR1BP31321 381 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 PGM1P36871 562 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 RASSF2P50749 326 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 DMTNQ08495 405 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 ZNF311Q5JNZ3 666 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 DHRS4L2Q6PKH6 230 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 CBLN3Q6UW01 205 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 PRICKLE2Q7Z3G6 844 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 SIAH3Q8IW03 269 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 CISD2Q8N5K1 135 aaKnown RBP15.47■□□□□ 0.07
COL7A1-202ENST00000422991 OR4K17Q8NGC6 315 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 CNOT9Q92600 299 aaKnown RBP15.47■□□□□ 0.07
COL7A1-202ENST00000422991 SH3YL1Q96HL8 342 aaPredicted RBP15.47■□□□□ 0.07
COL7A1-202ENST00000422991 LAT2Q9GZY6 243 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 DSN1Q9H410 356 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 PCNX3Q9H6A9 2034 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 DNAJB12Q9NXW2 375 aaKnown RBP15.47■□□□□ 0.07
COL7A1-202ENST00000422991 MED11Q9P086 117 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 SEC14L3Q9UDX4 400 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 ZNF232Q9UNY5 417 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 CHST2Q9Y4C5 530 aa15.47■□□□□ 0.07
COL7A1-202ENST00000422991 HEATR5AQ86XA9 2040 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 M0QX08 132 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 TFECO14948 347 aaPredicted RBP15.46■□□□□ 0.07
COL7A1-202ENST00000422991 GSTA4O15217 222 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 SUV39H1O43463 412 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 CBR3O75828 277 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 OPN1SWP03999 348 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 UBTFL6P0CB48 400 aaPredicted RBP15.46■□□□□ 0.07
COL7A1-202ENST00000422991 TCN1P20061 433 aaPredicted RBP15.46■□□□□ 0.07
COL7A1-202ENST00000422991 GDF1P27539 372 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 MAGEA5P43359 124 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 SUMO3P55854 103 aaPredicted RBP15.46■□□□□ 0.07
COL7A1-202ENST00000422991 NCALDP61601 193 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 ALDH6A1Q02252 535 aaKnown RBP15.46■□□□□ 0.07
COL7A1-202ENST00000422991 ZSWIM7Q19AV6 140 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 EIPR1Q53HC9 387 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 ZNF324BQ6AW86 544 aaPredicted RBP15.46■□□□□ 0.07
COL7A1-202ENST00000422991 COMTD1Q86VU5 262 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 GRAMD2AQ8IUY3 354 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 CLIP4Q8N3C7 705 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 FAM109AQ8N4B1 249 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 TMCO5AQ8N6Q1 288 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 TOR1AIP2Q8NFQ8 470 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 B4GALNT2Q8NHY0 566 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 FIG4Q92562 907 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 SNRNP40Q96DI7 357 aaKnown RBP15.46■□□□□ 0.07
COL7A1-202ENST00000422991 BARD1Q99728 777 aaKnown RBP15.46■□□□□ 0.07
COL7A1-202ENST00000422991 KLHDC3Q9BQ90 382 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 PINK1Q9BXM7 581 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 LRMDAQ9H2I8 198 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 ZDHHC11Q9H8X9 412 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 EXOSC3Q9NQT5 275 aaKnown RBP15.46■□□□□ 0.07
COL7A1-202ENST00000422991 QPCTLQ9NXS2 382 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 EGFL7Q9UHF1 273 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 ICAM5Q9UMF0 924 aa15.46■□□□□ 0.07
COL7A1-202ENST00000422991 TTLL8A6PVC2 850 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 GMFGO60234 142 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 TPST1O60507 370 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 DNAJC8O75937 253 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-202ENST00000422991 PDE5AO76074 875 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 EPPINO95925 133 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 CELA3AP09093 270 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 NCK1P16333 377 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 CD247P20963 164 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 MST1P26927 711 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 KDELR2P33947 212 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 P2RX1P51575 399 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 BNIP2Q12982 314 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 GANABQ14697 944 aaKnown RBP15.45■□□□□ 0.06
COL7A1-202ENST00000422991 LRRC23Q53EV4 343 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-202ENST00000422991 SMYD1Q8NB12 490 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 BHLHE22Q8NFJ8 381 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-202ENST00000422991 NR4A3Q92570 626 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 C1GALT1C1Q96EU7 318 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 DTNBP1Q96EV8 351 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms