RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 TPM3P06753 285 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 MPC1LP0DKB6 136 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 SMIM10L1P0DMW3 83 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 PCNAP12004 261 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 ENO3P13929 434 aaPredicted RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 OGNP20774 298 aaKnown RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 BMP5P22003 454 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 JAK1P23458 1154 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 NMBRP28336 390 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 CEACAM8P31997 349 aaPredicted RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 CETN2P41208 172 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 CAMPP49913 170 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 PPIAP62937 165 aaKnown RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 BTG2P78543 158 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 ADIPOQQ15848 244 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 SGO1Q5FBB7 561 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 NDUFAF5Q5TEU4 345 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 ASPHD1Q5U4P2 390 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 SHEQ5VZ18 495 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 CAPN13Q6MZZ7 669 aaPredicted RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 LRRC8EQ6NSJ5 796 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 PPP1R21Q6ZMI0 780 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 CENPUQ71F23 418 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 ADCK2Q7Z695 626 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 ASPGQ86U10 573 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 LDLRAD3Q86YD5 345 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 CNGA4Q8IV77 575 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 CCDC170Q8IYT3 715 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 TMEM251Q8N6I4 163 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 MFSD9Q8NBP5 474 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 RELL2Q8NC24 303 aaPredicted RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 ZNF740Q8NDX6 193 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 B3GNT7Q8NFL0 401 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 OR2M7Q8NG81 312 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 OR5M9Q8NGP3 310 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 GOT1L1Q8NHS2 421 aaPredicted RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 NT5CQ8TCD5 201 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 SLC13A3Q8WWT9 602 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 RNASE6Q93091 150 aaKnown RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 ELMOD3Q96FG2 381 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 SMIM10Q96HG1 83 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 SMC6Q96SB8 1091 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 ABHD1Q96SE0 405 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 SRSF8Q9BRL6 282 aaKnown RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 MRPL1Q9BYD6 325 aaKnown RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 DEFB126Q9BYW3 111 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 FRMD8P1Q9BZ68 369 aaPredicted RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 TTTY12Q9BZ98 90 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 NUF2Q9BZD4 464 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 IL22Q9GZX6 179 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 PCBD2Q9H0N5 130 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 DEFB127Q9H1M4 99 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 IL1RL2Q9HB29 575 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 RANGRFQ9HD47 186 aaPredicted RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 PNRC2Q9NPJ4 139 aaKnown RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 CCDC177Q9NQR7 707 aaPredicted RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 PAPOLBQ9NRJ5 636 aaKnown RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 B4GALT7Q9UBV7 327 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 YARS2Q9Y2Z4 477 aaKnown RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 LSM4Q9Y4Z0 139 aaKnown RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 MAGED1Q9Y5V3 778 aaPredicted RBP4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 LIPGQ9Y5X9 500 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 A3GALT2U3KPV4 340 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 RTTNQ86VV8 2226 aa4.21□□□□□ -1.74
CDC42EP3-202ENST00000422687 A0A087X1B8 175 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 A0A096LPK6 155 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 TRBV11-1A0A0K0K1C0 115 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 A0A1W2PPR1 153 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 TRBC2A0A5B9 178 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 GOLGA6L9A6NEM1 432 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 FAM166BA8MTA8 275 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 A8MV72 311 aaPredicted RBP4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 AKR1B15C9JRZ8 316 aaPredicted RBP4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 GOLGA6L19H0YKK7 550 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 CTDSP2O14595 271 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 ZBTB14O43829 449 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 PRKNO60260 465 aaPredicted RBP4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 B4GALT2O60909 372 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 ZFAND5O76080 213 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 OR6B1O95007 311 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 NKX2-2O95096 273 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 VAPBO95292 243 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 LY6G6DO95868 133 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 APRTP07741 180 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 TPM1P09493 284 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 SLC35G6P0C7Q6 338 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 GABRA1P14867 456 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 ZNF182P17025 639 aaPredicted RBP4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 MAOAP21397 527 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 CNR1P21554 472 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 SAT1P21673 171 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 CYLC1P35663 651 aaPredicted RBP4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 NPY2RP49146 381 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 ASCL1P50553 236 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 SSR4P51571 173 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 PNLIPRP2P54317 469 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 MFAP4P55083 255 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 TBPL1P62380 186 aa4.2□□□□□ -1.74
CDC42EP3-202ENST00000422687 SKP1P63208 163 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms