RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 RBM34P42696 430 aaKnown RBP17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 TMBIM6P55061 237 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 EFNB1P98172 346 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 TBCEQ15813 527 aaPredicted RBP17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 NNATQ16517 81 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 OCLNQ16625 522 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 FNDC7Q5VTL7 733 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 LAPTM4BQ86VI4 370 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 ZNF614Q8N883 585 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 TMEM239Q8WW34 195 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 OSTF1Q92882 214 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 CLIP3Q96DZ5 547 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 RHNO1Q9BSD3 238 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 NUDT9Q9BW91 350 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 NXF5Q9H1B4 397 aaKnown RBP17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 SLC26A1Q9H2B4 701 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 ACOT13Q9NPJ3 140 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 CNIH4Q9P003 139 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 TMEM5Q9Y2B1 443 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 C2orf92A0A1B0GVN3 265 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 EFCAB10A6NFE3 127 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 TRIM64BA6NI03 449 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 A8MUA0 341 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 ZNF99A8MXY4 864 aaPredicted RBP17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 KHNYNO15037 678 aaKnown RBP17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 SLC5A2P31639 672 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 SLC15A1P46059 708 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 MASP1P48740 699 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 PCYT1AP49585 367 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 GINS1Q14691 196 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 PHF19Q5T6S3 580 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 SYT6Q5T7P8 510 aaPredicted RBP17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 MEDAGQ5VYS4 303 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 SLC27A4Q6P1M0 643 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 WDR88Q6ZMY6 472 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 ZNF620Q6ZNG0 422 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 OVCH1Q7RTY7 1134 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 C9orf40Q8IXQ3 194 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 FAM26EQ8N5C1 309 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 OR4C3Q8NH37 302 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 RORBQ92753 470 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 GGHQ92820 318 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 FGF11Q92914 225 aa17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 EXOSC3Q9NQT5 275 aaKnown RBP17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 PPIEQ9UNP9 301 aaKnown RBP17.38■□□□□ 0.37
RBFOX1-204ENST00000422070 MUC3AQ02505 3323 aa17.37■□□□□ 0.37
RBFOX1-204ENST00000422070 FLRT2O43155 660 aa17.37■□□□□ 0.37
RBFOX1-204ENST00000422070 CSTAP01040 98 aa17.37■□□□□ 0.37
RBFOX1-204ENST00000422070 CSTF2P33240 577 aaKnown RBP eCLIP17.37■□□□□ 0.37
RBFOX1-204ENST00000422070 GPR143P51810 404 aa17.37■□□□□ 0.37
RBFOX1-204ENST00000422070 CTBP2P56545 445 aa17.37■□□□□ 0.37
RBFOX1-204ENST00000422070 PRKCDQ05655 676 aa17.37■□□□□ 0.37
RBFOX1-204ENST00000422070 TMPRSS11FQ6ZWK6 438 aa17.37■□□□□ 0.37
RBFOX1-204ENST00000422070 BMPERQ8N8U9 685 aa17.37■□□□□ 0.37
RBFOX1-204ENST00000422070 ZNF441Q8N8Z8 693 aa17.37■□□□□ 0.37
RBFOX1-204ENST00000422070 AGBL5Q8NDL9 886 aa17.37■□□□□ 0.37
RBFOX1-204ENST00000422070 HSPBAP1Q96EW2 488 aa17.37■□□□□ 0.37
RBFOX1-204ENST00000422070 FLRT3Q9NZU0 649 aa17.37■□□□□ 0.37
RBFOX1-204ENST00000422070 CDH10Q9Y6N8 788 aa17.37■□□□□ 0.37
RBFOX1-204ENST00000422070 A0A1B0GWA3 101 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 NGFRP08138 427 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 PAX7P23759 505 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 GP2P55259 537 aaKnown RBP17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 PLA2G2CQ5R387 149 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 UBE2UQ5VVX9 321 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 SLC29A4Q7RTT9 530 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 RAB2BQ8WUD1 216 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 CCNL2Q96S94 520 aaPredicted RBP17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 BCL7BQ9BQE9 202 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 PLA2G12AQ9BZM1 189 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 SEMA4CQ9C0C4 833 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 WWTR1Q9GZV5 400 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 EGLN3Q9H6Z9 239 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 MED31Q9Y3C7 131 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 M0R129 80 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 PIP5K1CO60331 668 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 ADAM11O75078 769 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 CPNE3O75131 537 aaKnown RBP17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 LDOC1O95751 146 aaPredicted RBP17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 TBXA2RP21731 343 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 LPAL2Q16609 132 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 GPR107Q5VW38 600 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 HLA-DQA1Q5Y7H0 255 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 RPL13AP3Q6NVV1 102 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 ULK3Q6PHR2 472 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 LINC00114Q6XXX2 140 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 ERI1Q8IV48 349 aaKnown RBP17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 PRSS58Q8IYP2 241 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 OR8D4Q8NGM9 314 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 C9orf43Q8TAL5 461 aaPredicted RBP17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 BRIX1Q8TDN6 353 aaKnown RBP17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 EFHD2Q96C19 240 aaPredicted RBP17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 C12orf43Q96C57 262 aaKnown RBP17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 LRFN5Q96NI6 719 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 TEX12Q9BXU0 123 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 ARRDC1-AS1Q9H2J1 176 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 MED17Q9NVC6 651 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 OCIAD1Q9NX40 245 aa17.36■□□□□ 0.37
RBFOX1-204ENST00000422070 IDSB3KWA1 339 aa17.35■□□□□ 0.37
RBFOX1-204ENST00000422070 AHCYL1O43865 530 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms