RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 FBXO27Q8NI29 283 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 RNF128Q8TEB7 428 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 HOXB13Q92826 284 aaPredicted RBP7.19□□□□□ -1.26
VIM-202ENST00000421459 CDS1Q92903 461 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 FBXW5Q969U6 566 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 ZBTB8AQ96BR9 441 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 DNAJA3Q96EY1 480 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 ZBED6CLQ96FA7 236 aaPredicted RBP7.19□□□□□ -1.26
VIM-202ENST00000421459 TRMT61AQ96FX7 289 aaKnown RBP7.19□□□□□ -1.26
VIM-202ENST00000421459 CHMP6Q96FZ7 201 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 TSSK3Q96PN8 268 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 TRIM2Q9C040 744 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 CXorf36Q9H7Y0 433 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 COQ10BQ9H8M1 238 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 ANKZF1Q9H8Y5 726 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 C3orf14Q9HBI5 128 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 NPAP1Q9NZP6 1156 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 SH3BP4Q9P0V3 963 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 GIMAP2Q9UG22 337 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 ING1Q9UK53 422 aaPredicted RBP7.19□□□□□ -1.26
VIM-202ENST00000421459 NFU1Q9UMS0 254 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 CARD8Q9Y2G2 431 aa7.19□□□□□ -1.26
VIM-202ENST00000421459 DSCAMO60469 2012 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 TLN2Q9Y4G6 2542 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 A0A1W2PP18 115 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 C7orf72A4D263 438 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 SHISA9B4DS77 424 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 NPIPB8E9PQR5 432 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 RIPK2O43353 540 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 CD5LO43866 347 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 SSX4O60224 188 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 CRCPO75575 148 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 RSL1D1O76021 490 aaKnown RBP7.18□□□□□ -1.26
VIM-202ENST00000421459 SLITRK5O94991 958 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 TP53P04637 393 aaPredicted RBP7.18□□□□□ -1.26
VIM-202ENST00000421459 THBS1P07996 1170 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 GSTA1P08263 222 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 FAM153BP0C7A2 387 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 LINC00032P0C843 101 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 MYL2P10916 166 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 SDC1P18827 310 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 ME2P23368 584 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 ADH6P28332 368 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 GSTM5P46439 218 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 CKAP4Q07065 602 aaKnown RBP7.18□□□□□ -1.26
VIM-202ENST00000421459 SPOCK1Q08629 439 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 FAM153CQ494X1 144 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 RFTN2Q52LD8 501 aaPredicted RBP7.18□□□□□ -1.26
VIM-202ENST00000421459 EXOSC6Q5RKV6 272 aaKnown RBP7.18□□□□□ -1.26
VIM-202ENST00000421459 TMEM201Q5SNT2 666 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.18□□□□□ -1.26
VIM-202ENST00000421459 PDSS1Q5T2R2 415 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 ZYG11AQ6WRX3 759 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 DNM1P46Q6ZS02 220 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 FRMD7Q6ZUT3 714 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 FCRLAQ7L513 359 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 BHLHA15Q7RTS1 189 aaPredicted RBP7.18□□□□□ -1.26
VIM-202ENST00000421459 TRABD2AQ86V40 505 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 HIPK1Q86Z02 1210 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 CDRT4Q8N9R6 151 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 OR2W6PQ8NHA6 318 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 RFWD2Q8NHY2 731 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 PIWIL2Q8TC59 973 aaKnown RBP7.18□□□□□ -1.26
VIM-202ENST00000421459 PHOSPHO1Q8TCT1 267 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 ACTRT2Q8TDY3 377 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 MZB1Q8WU39 189 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 HSD17B8Q92506 261 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 JADE3Q92613 823 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 KISS1RQ969F8 398 aaPredicted RBP7.18□□□□□ -1.26
VIM-202ENST00000421459 PPCDCQ96CD2 204 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 FAM120BQ96EK7 910 aaKnown RBP7.18□□□□□ -1.26
VIM-202ENST00000421459 ZNF300Q96RE9 604 aaPredicted RBP7.18□□□□□ -1.26
VIM-202ENST00000421459 TRAF4Q9BUZ4 470 aaPredicted RBP7.18□□□□□ -1.26
VIM-202ENST00000421459 HDHD5Q9BXW7 423 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 QRSL1Q9H0R6 528 aaKnown RBP7.18□□□□□ -1.26
VIM-202ENST00000421459 OR10A4Q9H209 315 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 TUBB1Q9H4B7 451 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 REEP4Q9H6H4 257 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 ESRP2Q9H6T0 727 aaKnown RBP7.18□□□□□ -1.26
VIM-202ENST00000421459 LRTM1Q9HBL6 345 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 RRAGDQ9NQL2 400 aaPredicted RBP7.18□□□□□ -1.26
VIM-202ENST00000421459 UBQLN4Q9NRR5 601 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 GLRX2Q9NS18 164 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 SIRT3Q9NTG7 399 aaPredicted RBP7.18□□□□□ -1.26
VIM-202ENST00000421459 CISD1Q9NZ45 108 aaKnown RBP7.18□□□□□ -1.26
VIM-202ENST00000421459 KLHL13Q9P2N7 655 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 STOML1Q9UBI4 398 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 B3GALT5Q9Y2C3 310 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 ARID1AO14497 2285 aa7.18□□□□□ -1.26
VIM-202ENST00000421459 USF3Q68DE3 2245 aa7.17□□□□□ -1.26
VIM-202ENST00000421459 ATRQ13535 2644 aa7.17□□□□□ -1.26
VIM-202ENST00000421459 HEATR5AQ86XA9 2040 aa7.17□□□□□ -1.26
VIM-202ENST00000421459 A0A096LNT2 108 aa7.17□□□□□ -1.26
VIM-202ENST00000421459 A0A1W2PR80 420 aa7.17□□□□□ -1.26
VIM-202ENST00000421459 FAM234BA2RU67 622 aa7.17□□□□□ -1.26
VIM-202ENST00000421459 CCDC151A5D8V7 595 aa7.17□□□□□ -1.26
VIM-202ENST00000421459 TMEM233B4DJY2 109 aa7.17□□□□□ -1.26
VIM-202ENST00000421459 KIF2AO00139 706 aaPredicted RBP7.17□□□□□ -1.26
VIM-202ENST00000421459 SCDO00767 359 aa7.17□□□□□ -1.26
VIM-202ENST00000421459 PHF1O43189 567 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms