RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 OR5AK3PQ8NH89 298 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 ZBTB8AQ96BR9 441 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 ZBTB9Q96C00 473 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 MBD6Q96DN6 1003 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 MARK4Q96L34 752 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 RNF145Q96MT1 663 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 WFIKKN1Q96NZ8 548 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 ZIM3Q96PE6 472 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 DUSP26Q9BV47 211 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 AKTIPQ9H8T0 292 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 ATAD3AQ9NVI7 634 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 ICAM5Q9UMF0 924 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 SNX8Q9Y5X2 465 aa9.9□□□□□ -0.82
SSBP3-206ENST00000420121 ROS1P08922 2347 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 CENPVL1A0A0U1RR11 272 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 ESPNB1AK53 854 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 SCDO00767 359 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 EIF1AYO14602 144 aaKnown RBP9.89□□□□□ -0.83
SSBP3-206ENST00000420121 TM9SF1O15321 606 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 RGS16O15492 202 aaPredicted RBP9.89□□□□□ -0.83
SSBP3-206ENST00000420121 SMNDC1O75940 238 aaKnown RBP eCLIP9.89□□□□□ -0.83
SSBP3-206ENST00000420121 NTN1O95631 604 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 HSPA4LO95757 839 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 OPN1LWP04000 364 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 DDX5P17844 614 aaKnown RBP9.89□□□□□ -0.83
SSBP3-206ENST00000420121 LOXP28300 417 aaPredicted RBP9.89□□□□□ -0.83
SSBP3-206ENST00000420121 RPS3AP61247 264 aaKnown RBP9.89□□□□□ -0.83
SSBP3-206ENST00000420121 RPS26P62854 115 aaKnown RBP9.89□□□□□ -0.83
SSBP3-206ENST00000420121 RAC1P63000 192 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 TOMM34Q15785 309 aaPredicted RBP9.89□□□□□ -0.83
SSBP3-206ENST00000420121 NDUFAF6Q330K2 333 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 LSM12Q3MHD2 195 aaKnown RBP9.89□□□□□ -0.83
SSBP3-206ENST00000420121 OR4F3Q6IEY1 312 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 FAM214BQ7L5A3 538 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 OLIG3Q7RTU3 272 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 CLEC4FQ8N1N0 589 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 ZNF610Q8N9Z0 462 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 OR5D16Q8NGK9 328 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 B4GALNT2Q8NHY0 566 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 ADAMTS15Q8TE58 950 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 PPP1R36Q96LQ0 422 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 ALPK1Q96QP1 1244 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 OR7D2Q96RA2 312 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 SDF2Q99470 211 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 TMEM185BQ9H7F4 350 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 NEUROD4Q9HD90 331 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 NOP53Q9NZM5 478 aaKnown RBP9.89□□□□□ -0.83
SSBP3-206ENST00000420121 KCNE5Q9UJ90 142 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 EIF3LQ9Y262 564 aaKnown RBP9.89□□□□□ -0.83
SSBP3-206ENST00000420121 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.89□□□□□ -0.83
SSBP3-206ENST00000420121 RAP2CQ9Y3L5 183 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 NIPBLQ6KC79 2804 aaeCLIP9.89□□□□□ -0.83
SSBP3-206ENST00000420121 DSCAMO60469 2012 aa9.89□□□□□ -0.83
SSBP3-206ENST00000420121 TNFSF11O14788 317 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 CXCL13O43927 109 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 SS18L1O75177 396 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-206ENST00000420121 C1QCP02747 245 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 RAF1P04049 648 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 CD53P19397 219 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 BGNP21810 368 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 DNASE1P24855 282 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 UGT2B10P36537 528 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 EIF1AXP47813 144 aaKnown RBP9.88□□□□□ -0.83
SSBP3-206ENST00000420121 SLC1A6P48664 564 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 ATP12AP54707 1039 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 RIPPLY3P57055 190 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 FOXF1Q12946 379 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 MAD2L1Q13257 205 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-206ENST00000420121 ESPNLQ6ZVH7 1005 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 MTERF4Q7Z6M4 381 aaKnown RBP9.88□□□□□ -0.83
SSBP3-206ENST00000420121 TGIF2LYQ8IUE0 185 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 KRTAP1-3Q8IUG1 177 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 WDR75Q8IWA0 830 aaKnown RBP9.88□□□□□ -0.83
SSBP3-206ENST00000420121 CHDHQ8NE62 594 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-206ENST00000420121 OR8J2Q8NGG1 315 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 OR2V1Q8NHB1 315 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 PHOSPHO1Q8TCT1 267 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 GPR119Q8TDV5 335 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 MOAP1Q96BY2 351 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 COQ10BQ9H8M1 238 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 HHATLQ9HCP6 504 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 KLHL28Q9NXS3 571 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 CLEC4AQ9UMR7 237 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 CARD8Q9Y2G2 431 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 ACTL7BQ9Y614 415 aa9.88□□□□□ -0.83
SSBP3-206ENST00000420121 ETV2O00321 342 aaPredicted RBP9.87□□□□□ -0.83
SSBP3-206ENST00000420121 RNASET2O00584 256 aaKnown RBP9.87□□□□□ -0.83
SSBP3-206ENST00000420121 CFLARO15519 480 aa9.87□□□□□ -0.83
SSBP3-206ENST00000420121 FCMRO60667 390 aa9.87□□□□□ -0.83
SSBP3-206ENST00000420121 DNAJA2O60884 412 aa9.87□□□□□ -0.83
SSBP3-206ENST00000420121 THBDP07204 575 aa9.87□□□□□ -0.83
SSBP3-206ENST00000420121 KRT16P08779 473 aa9.87□□□□□ -0.83
SSBP3-206ENST00000420121 ALDOCP09972 364 aaKnown RBP9.87□□□□□ -0.83
SSBP3-206ENST00000420121 MYZAPP0CAP1 466 aa9.87□□□□□ -0.83
SSBP3-206ENST00000420121 FCGR2AP12318 317 aa9.87□□□□□ -0.83
SSBP3-206ENST00000420121 POU2F1P14859 743 aa9.87□□□□□ -0.83
SSBP3-206ENST00000420121 HPGDP15428 266 aa9.87□□□□□ -0.83
SSBP3-206ENST00000420121 PRKCAP17252 672 aa9.87□□□□□ -0.83
SSBP3-206ENST00000420121 CRYGSP22914 178 aa9.87□□□□□ -0.83
SSBP3-206ENST00000420121 SOAT1P35610 550 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms