RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 ZBTB49Q6ZSB9 765 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 LACC1Q8IV20 430 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 DNAJC9Q8WXX5 260 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 SPACA9Q96E40 222 aaPredicted RBP13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 ZNF559Q9BR84 538 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 LAT2Q9GZY6 243 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 SEMA6AQ9H2E6 1030 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 CPNE5Q9HCH3 593 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 ATP13A2Q9NQ11 1180 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 RLIMQ9NVW2 624 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 LRRC42Q9Y546 428 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 AHCTF1Q8WYP5 2266 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 CACNA1GO43497 2377 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 CDC14CA4D256 554 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 CLDN24A6NM45 220 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 M0R3H8 397 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 WWP2O00308 870 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 AP3D1O14617 1153 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 ZNF264O43296 627 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 CSTAP01040 98 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 ITGAMP11215 1152 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 TNFRSF1BP20333 461 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 RRM2P31350 389 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 HSPA13P48723 471 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 GAS1P54826 345 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 RRADP55042 308 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 SUMO3P55854 103 aaPredicted RBP13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 RGS8P57771 180 aaPredicted RBP13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 SESN3P58005 492 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 ST3GAL3Q11203 375 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 SKP2Q13309 424 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 ATP1A4Q13733 1029 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 MEP1AQ16819 746 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 MICAQ29983 383 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 LPCAT4Q643R3 524 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 RBM45Q8IUH3 476 aaKnown RBP13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 ZNF248Q8NDW4 579 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 ARSGQ96EG1 525 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 ZNF597Q96LX8 424 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 CIB1Q99828 191 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 RBM4BQ9BQ04 359 aaKnown RBP13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 RBM4Q9BWF3 364 aaKnown RBP13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 TRIM2Q9C040 744 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 C12orf10Q9HB07 376 aa13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 SAMHD1Q9Y3Z3 626 aaKnown RBP13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 MRPS18BQ9Y676 258 aaKnown RBP13.07□□□□□ -0.32
SHMT1P1-201ENST00000419974 NPIPA5A0A0B4J1W7 369 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 HTR3EA5X5Y0 456 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 NPIPA7E9PJI5 369 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 TNFRSF11BO00300 401 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 TP53I11O14683 189 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 GADD45GO95257 159 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 IGF2P01344 180 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 ALPLP05186 524 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 H1F0P07305 194 aaKnown RBP13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 NPIPA8P0DM63 369 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 UBL4AP11441 157 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 ZNF23P17027 643 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 MSX1P28360 303 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 SSR4P51571 173 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 ALDH3A2P51648 485 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 C17orf67Q0P5P2 114 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 EPS8Q12929 822 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 TGIF1Q15583 401 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 RFX4Q33E94 735 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 FAHD1Q6P587 224 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 PAQR8Q8TEZ7 354 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 CNOT9Q92600 299 aaKnown RBP13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 SDCCAG3Q96C92 435 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 DCBLD2Q96PD2 775 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 ZNF184Q99676 751 aaPredicted RBP13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 MCHR1Q99705 422 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 LHPPQ9H008 270 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 COQ10BQ9H8M1 238 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 ZBTB20Q9HC78 741 aaPredicted RBP13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 MAN2C1Q9NTJ4 1040 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 VNN3Q9NY84 501 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 TEKT2Q9UIF3 430 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 RALYQ9UKM9 306 aaKnown RBP13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 PCDHGB6Q9Y5F9 930 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 CCDC88CQ9P219 2028 aa13.06□□□□□ -0.32
SHMT1P1-201ENST00000419974 IGSF10Q6WRI0 2623 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 LOC400499M0QZD8 3231 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 TRAPPC13A5PLN9 417 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 J3KTA2 159 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 ETV2O00321 342 aaPredicted RBP13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 NDUFB5O43674 189 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 E2F6O75461 281 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 CYP7B1O75881 506 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 RFX3P48380 749 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 PIN1Q13526 163 aaPredicted RBP13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 DAG1Q14118 895 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 TRAM2Q15035 370 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 CD226Q15762 336 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 CMPK2Q5EBM0 449 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 ENTPD8Q5MY95 495 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 ZNF770Q6IQ21 691 aaPredicted RBP13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 SLC30A6Q6NXT4 461 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 PACS2Q86VP3 889 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 TSPYL5Q86VY4 417 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms