RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 WDR45Q9Y484 360 aa12.83□□□□□ -0.36
SLC13A3-205ENST00000417157 PHF3Q92576 2039 aaKnown RBP12.83□□□□□ -0.36
SLC13A3-205ENST00000417157 NPIPA5A0A0B4J1W7 369 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 SERINC4A6NH21 518 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 SLC22A20A6NK97 555 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 NPIPA7E9PJI5 369 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 TNFRSF21O75509 655 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 RCBTB2O95199 551 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 ZCCHC18P0CG32 403 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 NPIPA8P0DM63 369 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 TMIGD3P0DMS9 266 aaPredicted RBP12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 ADH6P28332 368 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 CDKN2CP42773 168 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 ZNF136P52737 540 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 CBFBQ13951 182 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 TMEM44Q2T9K0 475 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 PLPPR5Q32ZL2 321 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 GPAT3Q53EU6 434 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 C6orf10Q5SRN2 563 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 PDSS1Q5T2R2 415 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 PDZK1Q5T2W1 519 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 DNAJC14Q6Y2X3 702 aaPredicted RBP12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 EIF3MQ7L2H7 374 aaKnown RBP12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 MCEMP1Q8IX19 187 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 ZNF619Q8N2I2 560 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 TMCO5AQ8N6Q1 288 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 METTL25Q8N6Q8 603 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 ACBD4Q8NC06 268 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 NAXEQ8NCW5 288 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 SMPDL3BQ92485 455 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 PMM1Q92871 262 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 RAB8BQ92930 207 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 TRNT1Q96Q11 434 aaKnown RBP12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 EBF4Q9BQW3 602 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 INPP5KQ9BT40 448 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 RAD21L1Q9H4I0 556 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 MKLN1Q9UL63 735 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 ICAM5Q9UMF0 924 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 TRIM33Q9UPN9 1127 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 SLC35A3Q9Y2D2 325 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 CARD8Q9Y2G2 431 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 ZNF175Q9Y473 711 aa12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 GPC6Q9Y625 555 aaPredicted RBP12.82□□□□□ -0.36
SLC13A3-205ENST00000417157 TMEM247A6NEH6 219 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 GJE1A6NN92 205 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 HMGN4O00479 90 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 FCMRO60667 390 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 UGT2B17O75795 530 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 CSTAP01040 98 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 GSNP06396 782 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 CRHP06850 196 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 SNRPB2P08579 225 aaKnown RBP12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 IGFBP2P18065 325 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 SSTR2P30874 369 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 ATP4BP51164 291 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 CCR4P51679 360 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 CASP9P55211 416 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 RAC1P63000 192 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 GNA13Q14344 377 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 FGFBP1Q14512 234 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 SQLEQ14534 574 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 SGCBQ16585 318 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 TYW3Q6IPR3 259 aaKnown RBP12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 LIX1LQ8IVB5 337 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 C9orf106Q8NAJ2 232 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 OR5M1Q8NGP8 315 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 OR9I1Q8NGQ6 314 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 OR5W2Q8NH69 310 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 MRGPRX4Q96LA9 322 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 RNF145Q96MT1 663 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 TREX2Q9BQ50 279 aaPredicted RBP12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 PINK1Q9BXM7 581 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 SAP130Q9H0E3 1048 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 PIGMQ9H3S5 423 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 MED4Q9NPJ6 270 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 CALML5Q9NZT1 146 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 P2RX2Q9UBL9 471 aa12.81□□□□□ -0.36
SLC13A3-205ENST00000417157 CYSRT1A8MQ03 144 aa12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 KDM4EB2RXH2 506 aaPredicted RBP12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 EIF1AYO14602 144 aaKnown RBP12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 EDF1O60869 148 aaKnown RBP12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 LINGO3P0C6S8 592 aa12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 FOXF1Q12946 379 aa12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 FBXL19-AS1Q494R0 122 aa12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 AP1ARQ63HQ0 302 aa12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 CBLN3Q6UW01 205 aa12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 FRRS1Q6ZNA5 592 aa12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 LRRC74BQ6ZQY2 392 aa12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 ESPNLQ6ZVH7 1005 aa12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 CMIPQ8IY22 773 aa12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 RELL2Q8NC24 303 aaPredicted RBP12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 ZFP90Q8TF47 636 aa12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 VPS33AQ96AX1 596 aa12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 ARSGQ96EG1 525 aa12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 C14orf79Q96F83 325 aa12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 LAT2Q9GZY6 243 aa12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 TPT1P8Q9HAU6 139 aa12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 CACYBPQ9HB71 228 aaKnown RBP12.8□□□□□ -0.36
SLC13A3-205ENST00000417157 NPDC1Q9NQX5 325 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms