RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ZNF117Q03924 483 aa20.95■□□□□ 0.94
SMARCB1-205ENST00000417137 REP15Q6BDI9 236 aa20.95■□□□□ 0.94
SMARCB1-205ENST00000417137 OR5M9Q8NGP3 310 aa20.95■□□□□ 0.94
SMARCB1-205ENST00000417137 TMEM19Q96HH6 336 aa20.95■□□□□ 0.94
SMARCB1-205ENST00000417137 CCDC106Q9BWC9 280 aa20.95■□□□□ 0.94
SMARCB1-205ENST00000417137 LAT2Q9GZY6 243 aa20.95■□□□□ 0.94
SMARCB1-205ENST00000417137 PNPLA3Q9NST1 481 aa20.95■□□□□ 0.94
SMARCB1-205ENST00000417137 TNFRSF10DQ9UBN6 386 aa20.95■□□□□ 0.94
SMARCB1-205ENST00000417137 POLEQ07864 2286 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 CLEC18AA5D8T8 446 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 E9PLN8 166 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 WDR1O75083 606 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 NUDT14O95848 222 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 DBIP07108 87 aaKnown RBP20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 IL7RP16871 459 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 PTGER4P35408 488 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 GFRA1P56159 465 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 KCNJ10P78508 379 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 CRYZQ08257 329 aaKnown RBP20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 FGFBP1Q14512 234 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 MAPK14Q16539 360 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 RAET1LQ5VY80 246 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 TMEM211Q6ICI0 200 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 ZNF585AQ6P3V2 769 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 CLEC18BQ6UXF7 455 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 ZGRF1Q86YA3 2104 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 CMIPQ8IY22 773 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 CLEC18CQ8NCF0 446 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 TOR1AIP2Q8NFQ8 470 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 ZBTB8AQ96BR9 441 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 LRRC58Q96CX6 371 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 ZG16BQ96DA0 208 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 CMTM5Q96DZ9 223 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 CCT8L2Q96SF2 557 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 TREX2Q9BQ50 279 aaPredicted RBP20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 VKORC1Q9BQB6 163 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 UGT2B28Q9BY64 529 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 RUBCNLQ9H714 662 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 ALKBH4Q9NXW9 302 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 STOML1Q9UBI4 398 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 ERRFI1Q9UJM3 462 aaPredicted RBP20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 ADAM21Q9UKJ8 722 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 ICAM5Q9UMF0 924 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 ZNF232Q9UNY5 417 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 MEMO1Q9Y316 297 aa20.94■□□□□ 0.94
SMARCB1-205ENST00000417137 AHRRA9YTQ3 701 aa20.93■□□□□ 0.94
SMARCB1-205ENST00000417137 NUDT7P0C024 238 aa20.93■□□□□ 0.94
SMARCB1-205ENST00000417137 COX4I1P13073 169 aa20.93■□□□□ 0.94
SMARCB1-205ENST00000417137 RNF144AP50876 292 aaPredicted RBP20.93■□□□□ 0.94
SMARCB1-205ENST00000417137 MAPK11Q15759 364 aa20.93■□□□□ 0.94
SMARCB1-205ENST00000417137 ARSKQ6UWY0 536 aa20.93■□□□□ 0.94
SMARCB1-205ENST00000417137 TMCO5AQ8N6Q1 288 aa20.93■□□□□ 0.94
SMARCB1-205ENST00000417137 OR5W2Q8NH69 310 aa20.93■□□□□ 0.94
SMARCB1-205ENST00000417137 BBS10Q8TAM1 723 aa20.93■□□□□ 0.94
SMARCB1-205ENST00000417137 MYLK2Q9H1R3 596 aa20.93■□□□□ 0.94
SMARCB1-205ENST00000417137 IKZF5Q9H5V7 419 aa20.93■□□□□ 0.94
SMARCB1-205ENST00000417137 TMEM38AQ9H6F2 299 aa20.93■□□□□ 0.94
SMARCB1-205ENST00000417137 BCL2L10Q9HD36 194 aa20.93■□□□□ 0.94
SMARCB1-205ENST00000417137 VDAC3Q9Y277 283 aa20.93■□□□□ 0.94
SMARCB1-205ENST00000417137 L3MBTL1Q9Y468 752 aa20.93■□□□□ 0.94
SMARCB1-205ENST00000417137 CYP7B1O75881 506 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 DCTN3O75935 186 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 FAM107AO95990 144 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 ARAFP10398 606 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 TCEA1P23193 301 aaKnown RBP20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 SLC6A2P23975 617 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 ACVR2AP27037 513 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 EIF1P41567 113 aaKnown RBP20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 MTPNP58546 118 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 CDK6Q00534 326 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 CBFBQ13951 182 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 CAPRIN1Q14444 709 aaKnown RBP20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 LARS2Q15031 903 aaKnown RBP20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 BCL2A1Q16548 175 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 ZSWIM7Q19AV6 140 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 EMC4Q5J8M3 183 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 GKAP1Q5VSY0 366 aaPredicted RBP20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 NANOGP8Q6NSW7 305 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 REEP3Q6NUK4 255 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 CBLN3Q6UW01 205 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 OR52P1PQ8NH57 321 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 WDR60Q8WVS4 1066 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 MAL2Q969L2 176 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 PRDM14Q9GZV8 571 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 QRSL1Q9H0R6 528 aaKnown RBP20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 ARMC7Q9H6L4 198 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 NANOGQ9H9S0 305 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 EFCAB1Q9HAE3 211 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 MED17Q9NVC6 651 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 CAMK2AQ9UQM7 478 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 IFT52Q9Y366 437 aa20.92■□□□□ 0.94
SMARCB1-205ENST00000417137 CENPVL1A0A0U1RR11 272 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 UBTFL6P0CB48 400 aaPredicted RBP20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 PEPDP12955 493 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 CPN1P15169 458 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 ZNF17P17021 662 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 RPS4Y1P22090 263 aaKnown RBP20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 PGM1P36871 562 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 B3GALT5-AS1P59052 145 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 SRSF1Q07955 248 aaKnown RBP eCLIP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms