RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 AQP8O94778 261 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 POU2F1P14859 743 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 DDX5P17844 614 aaKnown RBP11.6□□□□□ -0.55
LINC00339-202ENST00000416769 CSNK2A2P19784 350 aaPredicted RBP11.6□□□□□ -0.55
LINC00339-202ENST00000416769 DRD5P21918 477 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 DPP4P27487 766 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 GCKP35557 465 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 PPICP45877 212 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 SLC6A8P48029 635 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 CLNS1AP54105 237 aaKnown RBP11.6□□□□□ -0.55
LINC00339-202ENST00000416769 CLDN20P56880 219 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 STX1BP61266 288 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 UFM1P61960 85 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 SNTA1Q13424 505 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 SQLEQ14534 574 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 PTGR1Q14914 329 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 RIMKLAQ8IXN7 391 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 CCDC116Q8IYX3 515 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 MIER2Q8N344 545 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 GLB1L3Q8NCI6 653 aaPredicted RBP11.6□□□□□ -0.55
LINC00339-202ENST00000416769 CCDC197Q8NCU1 140 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 RNF138Q8WVD3 245 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 PIGTQ969N2 578 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 SLC35A4Q96G79 324 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 ZNF764Q96H86 408 aaPredicted RBP11.6□□□□□ -0.55
LINC00339-202ENST00000416769 VSTM2LQ96N03 204 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 PRPF18Q99633 342 aaKnown RBP11.6□□□□□ -0.55
LINC00339-202ENST00000416769 NPAS1Q99742 590 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 DSN1Q9H410 356 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 ZNF385DQ9H6B1 395 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 SAR1AQ9NR31 198 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 MED11Q9P086 117 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 ATP6V1HQ9UI12 483 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 CLEC4AQ9UMR7 237 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 ALPK2Q86TB3 2170 aa11.6□□□□□ -0.55
LINC00339-202ENST00000416769 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.59□□□□□ -0.55
LINC00339-202ENST00000416769 OR6C70A6NIJ9 312 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 ACOX3O15254 700 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 AKAP10O43572 662 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 GAB1Q13480 694 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 PDE7AQ13946 482 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 EXOC3L2Q2M3D2 409 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 RAET1LQ5VY80 246 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 NATD1Q8N6N6 113 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 OR2M3Q8NG83 312 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 OR7G2Q8NG99 324 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 CLHC1Q8NHS4 586 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 CDC26Q8NHZ8 85 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 GFM2Q969S9 779 aaKnown RBP11.59□□□□□ -0.55
LINC00339-202ENST00000416769 EXOSC8Q96B26 276 aaKnown RBP11.59□□□□□ -0.55
LINC00339-202ENST00000416769 TESCQ96BS2 214 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 COQ8BQ96D53 544 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 BTBD9Q96Q07 612 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 ZBTB18Q99592 522 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 KLHDC3Q9BQ90 382 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 BDH2Q9BUT1 245 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 KLHL4Q9C0H6 718 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 FOLH1BQ9HBA9 442 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 UTS2RQ9UKP6 389 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 ZNF337Q9Y3M9 751 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 FREM1Q5H8C1 2179 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 CUBNO60494 3623 aa11.59□□□□□ -0.55
LINC00339-202ENST00000416769 FAM171A2A8MVW0 826 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 H3BML4 177 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 SCAMP2O15127 329 aaKnown RBP11.58□□□□□ -0.56
LINC00339-202ENST00000416769 SLC22A2O15244 555 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 KLF4O43474 513 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 DCTN3O75935 186 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 HK1P19367 917 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 CHMP24386 653 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 IL12AP29459 219 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 HPCAL1P37235 193 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 KCNJ5P48544 419 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 PPP2R2BQ00005 443 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 PON3Q15166 354 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 GUSBP1Q15486 140 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 DPY19L1Q2PZI1 675 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 CPTPQ5TA50 214 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 AAGABQ6PD74 315 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 PRSS57Q6UWY2 283 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 MTDHQ86UE4 582 aaKnown RBP11.58□□□□□ -0.56
LINC00339-202ENST00000416769 SLC44A2Q8IWA5 706 aaPredicted RBP11.58□□□□□ -0.56
LINC00339-202ENST00000416769 SAMD14Q8IZD0 417 aaPredicted RBP11.58□□□□□ -0.56
LINC00339-202ENST00000416769 KRTCAP2Q8N6L1 136 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 FADS6Q8N9I5 356 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 OR4K17Q8NGC6 315 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 PPCDCQ96CD2 204 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 TMCO6Q96DC7 493 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 TEX37Q96LM6 180 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 GSX2Q9BZM3 304 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 NMUR2Q9GZQ4 415 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 MYLK2Q9H1R3 596 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 MIEF1Q9NQG6 463 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 ATAD3AQ9NVI7 634 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 ZNF226Q9NYT6 803 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 SH3BP4Q9P0V3 963 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 CFL2Q9Y281 166 aa11.58□□□□□ -0.56
LINC00339-202ENST00000416769 FAM234BA2RU67 622 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 OR2M5A3KFT3 312 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 C16orf97H3BN30 126 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms