RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 FAPQ12884 760 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 NOXRED1Q6NXP6 359 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 SSX8Q7RTT4 187 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 BANPQ8N9N5 519 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 GATSQ8NAP1 163 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 KBTBD8Q8NFY9 601 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 OR10H5Q8NGA6 315 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 GIMAP5Q96F15 307 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 EGLN2Q96KS0 407 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 SRXN1Q9BYN0 137 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 GSTO2Q9H4Y5 243 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 ALG2Q9H553 416 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 EQTNQ9NQ60 294 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 FAIMQ9NVQ4 179 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 TMEM160Q9NX00 188 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 CDC42EP3Q9UKI2 254 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 POLR3HQ9Y535 204 aaPredicted RBP13.66□□□□□ -0.22
DDX56-202ENST00000415758 SVEP1Q4LDE5 3571 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 GOLGA8QA0A0J9YX86 632 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 GOLGA8OA6NCC3 632 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 SHISA9B4DS77 424 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 GOLGA8NF8WBI6 632 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 GOLGA8RI6L899 631 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 UBFD1O14562 309 aaKnown RBP13.65□□□□□ -0.22
DDX56-202ENST00000415758 GPRIN2O60269 458 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 RSL1D1O76021 490 aaKnown RBP13.65□□□□□ -0.22
DDX56-202ENST00000415758 NTN1O95631 604 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 HSPA4LO95757 839 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 SHC1P29353 583 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 CASQ1P31415 396 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 THBS2P35442 1172 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 HSPB3Q12988 150 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 KIAA0040Q15053 153 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 C6orf52Q5T4I8 152 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 C8orf74Q6P047 294 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 ZCCHC12Q6PEW1 402 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 Q6ZT83 130 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 FCRLAQ7L513 359 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 ZAR1Q86SH2 424 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 SLC43A2Q8N370 569 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 SLC16A11Q8NCK7 471 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 NUP43Q8NFH3 380 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 B4GALNT2Q8NHY0 566 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 TNFRSF13CQ96RJ3 184 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 IQCGQ9H095 443 aaKnown RBP13.65□□□□□ -0.22
DDX56-202ENST00000415758 L2HGDHQ9H9P8 463 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 GRPEL1Q9HAV7 217 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 BCO1Q9HAY6 547 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 MID1IP1Q9NPA3 183 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 B3GALT5Q9Y2C3 310 aa13.65□□□□□ -0.22
DDX56-202ENST00000415758 PLCE1Q9P212 2302 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 IGHV4-30-2A0A087WSY4 118 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 GJE1A6NN92 205 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 NPIPB8E9PQR5 432 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 H3BQF6 201 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 SCDO00767 359 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 SSX4O60224 188 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 TBX19O60806 448 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 RAMP1O60894 148 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 ACP2P11117 423 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 HPGDP15428 266 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 SFTPDP35247 375 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 FRKP42685 505 aaPredicted RBP13.64□□□□□ -0.23
DDX56-202ENST00000415758 SERPINB4P48594 390 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 DSCR9P59020 149 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 CD226Q15762 336 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 DUSP5Q16690 384 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 IMPG1Q17R60 797 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 EXOSC6Q5RKV6 272 aaKnown RBP13.64□□□□□ -0.23
DDX56-202ENST00000415758 BHLHA15Q7RTS1 189 aaPredicted RBP13.64□□□□□ -0.23
DDX56-202ENST00000415758 MTERF4Q7Z6M4 381 aaKnown RBP13.64□□□□□ -0.23
DDX56-202ENST00000415758 ZNF619Q8N2I2 560 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 CEP112Q8N8E3 955 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 SH3YL1Q96HL8 342 aaPredicted RBP13.64□□□□□ -0.23
DDX56-202ENST00000415758 RADILQ96JH8 1075 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 RRAGDQ9NQL2 400 aaPredicted RBP13.64□□□□□ -0.23
DDX56-202ENST00000415758 ING1Q9UK53 422 aaPredicted RBP13.64□□□□□ -0.23
DDX56-202ENST00000415758 CCL27Q9Y4X3 112 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 ACTL7BQ9Y614 415 aa13.64□□□□□ -0.23
DDX56-202ENST00000415758 A0A087WUV0 522 aaPredicted RBP13.63□□□□□ -0.23
DDX56-202ENST00000415758 ELOA3DA6NLF2 546 aaPredicted RBP13.63□□□□□ -0.23
DDX56-202ENST00000415758 KIF2AO00139 706 aaPredicted RBP13.63□□□□□ -0.23
DDX56-202ENST00000415758 ZNF195O14628 629 aa13.63□□□□□ -0.23
DDX56-202ENST00000415758 PDPK1O15530 556 aa13.63□□□□□ -0.23
DDX56-202ENST00000415758 PYGBP11216 843 aa13.63□□□□□ -0.23
DDX56-202ENST00000415758 PRPH2P23942 346 aa13.63□□□□□ -0.23
DDX56-202ENST00000415758 GCAP28676 217 aa13.63□□□□□ -0.23
DDX56-202ENST00000415758 GPC1P35052 558 aa13.63□□□□□ -0.23
DDX56-202ENST00000415758 OR3A2P47893 321 aa13.63□□□□□ -0.23
DDX56-202ENST00000415758 PRIM2P49643 509 aa13.63□□□□□ -0.23
DDX56-202ENST00000415758 PRKAG1P54619 331 aa13.63□□□□□ -0.23
DDX56-202ENST00000415758 RAC3P60763 192 aa13.63□□□□□ -0.23
DDX56-202ENST00000415758 NAA20P61599 178 aa13.63□□□□□ -0.23
DDX56-202ENST00000415758 ETF1P62495 437 aaKnown RBP13.63□□□□□ -0.23
DDX56-202ENST00000415758 VLDLRP98155 873 aa13.63□□□□□ -0.23
DDX56-202ENST00000415758 LOXL1Q08397 574 aaPredicted RBP13.63□□□□□ -0.23
DDX56-202ENST00000415758 FOXF1Q12946 379 aa13.63□□□□□ -0.23
DDX56-202ENST00000415758 PPA1Q15181 289 aa13.63□□□□□ -0.23
DDX56-202ENST00000415758 TMEM249Q2WGJ8 235 aa13.63□□□□□ -0.23
DDX56-202ENST00000415758 ELOA3BQ3SY89 546 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms