RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 PCNX1Q96RV3 2341 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 PCNX3Q9H6A9 2034 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 TMEM247A6NEH6 219 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 CD8B2A6NJW9 211 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 PRSS44E7EML9 344 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 CLIC1O00299 241 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 TNFRSF21O75509 655 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 H6PDO95479 791 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 NUDT14O95848 222 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 PPIBP23284 216 aaKnown RBP22.88■■□□□ 1.25
CPNE1-207ENST00000414664 MVDP53602 400 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 DSTNP60981 165 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 SYPL1Q16563 259 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 EIF3MQ7L2H7 374 aaKnown RBP22.88■■□□□ 1.25
CPNE1-207ENST00000414664 CHMP1BQ7LBR1 199 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 OLIG3Q7RTU3 272 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 MEIOBQ8N635 442 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 ANKFN1Q8N957 763 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 TOR1AIP2Q8NFQ8 470 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 MED17Q9NVC6 651 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 CALML5Q9NZT1 146 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 KCNE5Q9UJ90 142 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 LEF1Q9UJU2 399 aaPredicted RBP22.88■■□□□ 1.25
CPNE1-207ENST00000414664 ICAM5Q9UMF0 924 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 ZNF337Q9Y3M9 751 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 AP4B1Q9Y6B7 739 aa22.88■■□□□ 1.25
CPNE1-207ENST00000414664 SPTAN1Q13813 2472 aaKnown RBP22.88■■□□□ 1.25
CPNE1-207ENST00000414664 PRAMEF27A3QJZ7 478 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 C7orf72A4D263 438 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 HSPB2A8KAH6 182 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 CSTAP01040 98 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 IL2RAP01589 272 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 TIMP3P35625 211 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 EIF1P41567 113 aaKnown RBP22.87■■□□□ 1.25
CPNE1-207ENST00000414664 CLDN18P56856 261 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 CHRNEQ04844 493 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 GNA13Q14344 377 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 HSPB2Q16082 182 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 TMEM44Q2T9K0 475 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 PLPPR5Q32ZL2 321 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 PAGE3Q5JUK9 113 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 GTPBP8Q8N3Z3 284 aaPredicted RBP22.87■■□□□ 1.25
CPNE1-207ENST00000414664 OR5M1Q8NGP8 315 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 LILRB4Q8NHJ6 448 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 AURKBQ96GD4 344 aaPredicted RBP22.87■■□□□ 1.25
CPNE1-207ENST00000414664 MTHFD2LQ9H903 347 aaPredicted RBP22.87■■□□□ 1.25
CPNE1-207ENST00000414664 CHST11Q9NPF2 352 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.87■■□□□ 1.25
CPNE1-207ENST00000414664 KLHL14Q9P2G3 628 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 SLC35A3Q9Y2D2 325 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 NDUFAF1Q9Y375 327 aa22.87■■□□□ 1.25
CPNE1-207ENST00000414664 H3BML4 177 aa22.86■■□□□ 1.25
CPNE1-207ENST00000414664 ANGPT2O15123 496 aa22.86■■□□□ 1.25
CPNE1-207ENST00000414664 ETFAP13804 333 aa22.86■■□□□ 1.25
CPNE1-207ENST00000414664 HTR1EP28566 365 aa22.86■■□□□ 1.25
CPNE1-207ENST00000414664 RNF144AP50876 292 aaPredicted RBP22.86■■□□□ 1.25
CPNE1-207ENST00000414664 FADDQ13158 208 aa22.86■■□□□ 1.25
CPNE1-207ENST00000414664 CGB2Q6NT52 195 aa22.86■■□□□ 1.25
CPNE1-207ENST00000414664 CBLN3Q6UW01 205 aa22.86■■□□□ 1.25
CPNE1-207ENST00000414664 CCDC71Q8IV32 467 aaPredicted RBP22.86■■□□□ 1.25
CPNE1-207ENST00000414664 TMCO5AQ8N6Q1 288 aa22.86■■□□□ 1.25
CPNE1-207ENST00000414664 OR5W2Q8NH69 310 aa22.86■■□□□ 1.25
CPNE1-207ENST00000414664 TUBA1CQ9BQE3 449 aa22.86■■□□□ 1.25
CPNE1-207ENST00000414664 LAT2Q9GZY6 243 aa22.86■■□□□ 1.25
CPNE1-207ENST00000414664 ARHGAP21Q5T5U3 1957 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 FLNBO75369 2602 aaKnown RBP22.85■■□□□ 1.25
CPNE1-207ENST00000414664 A0A0G2JNJ9 132 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 DYNC1I1O14576 645 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 CHRM4P08173 479 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 SNRPB2P08579 225 aaKnown RBP22.85■■□□□ 1.25
CPNE1-207ENST00000414664 HOXB9P17482 250 aaPredicted RBP22.85■■□□□ 1.25
CPNE1-207ENST00000414664 CRISP3P54108 245 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 CBFBQ13951 182 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 FGFBP1Q14512 234 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 RGNQ15493 299 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 MAPK14Q16539 360 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 SEM1Q6ZVN7 128 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 UBQLNLQ8IYU4 475 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 ARSGQ96EG1 525 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 ZNF317Q96PQ6 595 aaPredicted RBP22.85■■□□□ 1.25
CPNE1-207ENST00000414664 UCN2Q96RP3 112 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 SLC38A1Q9H2H9 487 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 Q9UFV3 132 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 CORO2BQ9UQ03 480 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 L3MBTL1Q9Y468 752 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 HECTD1Q9ULT8 2610 aa22.85■■□□□ 1.25
CPNE1-207ENST00000414664 MED12Q93074 2177 aa22.84■■□□□ 1.25
CPNE1-207ENST00000414664 MBD3L4A6NDZ8 208 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-207ENST00000414664 MBD3L3A6NE82 208 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-207ENST00000414664 MBD3L5A6NJ08 208 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-207ENST00000414664 OIP5O43482 229 aa22.84■■□□□ 1.25
CPNE1-207ENST00000414664 CYP7B1O75881 506 aa22.84■■□□□ 1.25
CPNE1-207ENST00000414664 TFPTP0C1Z6 253 aa22.84■■□□□ 1.25
CPNE1-207ENST00000414664 LINGO3P0C6S8 592 aa22.84■■□□□ 1.25
CPNE1-207ENST00000414664 ADH6P28332 368 aa22.84■■□□□ 1.25
CPNE1-207ENST00000414664 CEACAM8P31997 349 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-207ENST00000414664 CCR4P51679 360 aa22.84■■□□□ 1.25
CPNE1-207ENST00000414664 RPS3AP61247 264 aaKnown RBP22.84■■□□□ 1.25
CPNE1-207ENST00000414664 KCNJ10P78508 379 aa22.84■■□□□ 1.25
CPNE1-207ENST00000414664 SF3A3Q12874 501 aaKnown RBP eCLIP22.84■■□□□ 1.256e-8■■■□□ 19.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms