RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 CTBP2P56545 445 aa17.16■□□□□ 0.34
CPSF7-204ENST00000413232 POU6F2P78424 691 aaPredicted RBP17.16■□□□□ 0.34
CPSF7-204ENST00000413232 ZNF117Q03924 483 aa17.16■□□□□ 0.34
CPSF7-204ENST00000413232 NDUFAF6Q330K2 333 aa17.16■□□□□ 0.34
CPSF7-204ENST00000413232 XKR7Q5GH72 579 aa17.16■□□□□ 0.34
CPSF7-204ENST00000413232 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.16■□□□□ 0.34
CPSF7-204ENST00000413232 HBMQ6B0K9 141 aa17.16■□□□□ 0.34
CPSF7-204ENST00000413232 ESPNLQ6ZVH7 1005 aa17.16■□□□□ 0.34
CPSF7-204ENST00000413232 TRABD2AQ86V40 505 aa17.16■□□□□ 0.34
CPSF7-204ENST00000413232 KRTCAP2Q8N6L1 136 aa17.16■□□□□ 0.34
CPSF7-204ENST00000413232 B4GALNT2Q8NHY0 566 aa17.16■□□□□ 0.34
CPSF7-204ENST00000413232 OSTF1Q92882 214 aa17.16■□□□□ 0.34
CPSF7-204ENST00000413232 SRXN1Q9BYN0 137 aa17.16■□□□□ 0.34
CPSF7-204ENST00000413232 IQCGQ9H095 443 aaKnown RBP17.16■□□□□ 0.34
CPSF7-204ENST00000413232 PIGUQ9H490 435 aa17.16■□□□□ 0.34
CPSF7-204ENST00000413232 CXorf36Q9H7Y0 433 aa17.16■□□□□ 0.34
CPSF7-204ENST00000413232 STOML1Q9UBI4 398 aa17.16■□□□□ 0.34
CPSF7-204ENST00000413232 MID2Q9UJV3 735 aa17.16■□□□□ 0.34
CPSF7-204ENST00000413232 MCTS1Q9ULC4 181 aaKnown RBP17.16■□□□□ 0.34
CPSF7-204ENST00000413232 SNX8Q9Y5X2 465 aa17.16■□□□□ 0.34
CPSF7-204ENST00000413232 SCDO00767 359 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 SLU7O95391 586 aaKnown RBP17.15■□□□□ 0.34
CPSF7-204ENST00000413232 HPGDP15428 266 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 CREB1P16220 341 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 FPR1P21462 350 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 SFTPDP35247 375 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 SERPINB4P48594 390 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 FOXF1Q12946 379 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 TOMM34Q15785 309 aaPredicted RBP17.15■□□□□ 0.34
CPSF7-204ENST00000413232 KLHL26Q53HC5 615 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 LRIG3Q6UXM1 1119 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 R3HCC1LQ7Z5L2 792 aaKnown RBP17.15■□□□□ 0.34
CPSF7-204ENST00000413232 YTHDF3Q7Z739 585 aaKnown RBP17.15■□□□□ 0.34
CPSF7-204ENST00000413232 LILRA2Q8N149 483 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 PSMA8Q8TAA3 256 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 PHOSPHO1Q8TCT1 267 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 CAVIN3Q969G5 261 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 COX4I2Q96KJ9 171 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 STACQ99469 402 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 C1orf50Q9BV19 199 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 C12orf49Q9H741 205 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 DUSP22Q9NRW4 184 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 GPATCH2Q9NW75 528 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 ZDHHC2Q9UIJ5 367 aa17.15■□□□□ 0.34
CPSF7-204ENST00000413232 TRIM64A6NGJ6 449 aa17.14■□□□□ 0.33
CPSF7-204ENST00000413232 TRIM64BA6NI03 449 aa17.14■□□□□ 0.33
CPSF7-204ENST00000413232 SYNGR4O95473 234 aa17.14■□□□□ 0.33
CPSF7-204ENST00000413232 C6orf47O95873 294 aa17.14■□□□□ 0.33
CPSF7-204ENST00000413232 AGTR1P30556 359 aa17.14■□□□□ 0.33
CPSF7-204ENST00000413232 LCN1P31025 176 aa17.14■□□□□ 0.33
CPSF7-204ENST00000413232 CCT3P49368 545 aaKnown RBP17.14■□□□□ 0.33
CPSF7-204ENST00000413232 ZNF844Q08AG5 666 aa17.14■□□□□ 0.33
CPSF7-204ENST00000413232 C6orf136Q5SQH8 315 aa17.14■□□□□ 0.33
CPSF7-204ENST00000413232 CDC73Q6P1J9 531 aa17.14■□□□□ 0.33
CPSF7-204ENST00000413232 MISPQ8IVT2 679 aa17.14■□□□□ 0.33
CPSF7-204ENST00000413232 TCP10LQ8TDR4 215 aa17.14■□□□□ 0.33
CPSF7-204ENST00000413232 ABHD3Q8WU67 409 aa17.14■□□□□ 0.33
CPSF7-204ENST00000413232 CHMP6Q96FZ7 201 aa17.14■□□□□ 0.33
CPSF7-204ENST00000413232 KLHL15Q96M94 604 aa17.14■□□□□ 0.33
CPSF7-204ENST00000413232 ANKZF1Q9H8Y5 726 aa17.14■□□□□ 0.33
CPSF7-204ENST00000413232 PAQR5Q9NXK6 330 aaPredicted RBP17.14■□□□□ 0.33
CPSF7-204ENST00000413232 ICAM5Q9UMF0 924 aa17.14■□□□□ 0.33
CPSF7-204ENST00000413232 CARD8Q9Y2G2 431 aa17.14■□□□□ 0.33
CPSF7-204ENST00000413232 NPIPB9F8W1W9 429 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 HEXAP06865 529 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 HPCAL1P37235 193 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 CARD18P57730 90 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 TP53BP2Q13625 1128 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 TSC22D1Q15714 1073 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 ZNF239Q16600 458 aaKnown RBP17.13■□□□□ 0.33
CPSF7-204ENST00000413232 BEX5Q5H9J7 111 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 IL23RQ5VWK5 629 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 PRSS57Q6UWY2 283 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 C20orf204Q6ZNR8 217 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 NUFIP2Q7Z417 695 aaKnown RBP17.13■□□□□ 0.33
CPSF7-204ENST00000413232 FBXO27Q8NI29 283 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 OR5P2Q8WZ92 322 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 COQ8BQ96D53 544 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 PLPPR2Q96GM1 343 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 PPP3R2Q96LZ3 170 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 ACTRT3Q9BYD9 372 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 ACTR6Q9GZN1 396 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 GLRX2Q9NS18 164 aa17.13■□□□□ 0.33
CPSF7-204ENST00000413232 ALPK2Q86TB3 2170 aa17.12■□□□□ 0.33
CPSF7-204ENST00000413232 TMEM114B3SHH9 223 aa17.12■□□□□ 0.33
CPSF7-204ENST00000413232 SMAD7O15105 426 aaKnown RBP17.12■□□□□ 0.33
CPSF7-204ENST00000413232 SKAP2O75563 359 aaPredicted RBP17.12■□□□□ 0.33
CPSF7-204ENST00000413232 ME2P23368 584 aa17.12■□□□□ 0.33
CPSF7-204ENST00000413232 DCST2Q5T1A1 773 aa17.12■□□□□ 0.33
CPSF7-204ENST00000413232 ZNF704Q6ZNC4 412 aaPredicted RBP17.12■□□□□ 0.33
CPSF7-204ENST00000413232 BEND4Q6ZU67 534 aa17.12■□□□□ 0.33
CPSF7-204ENST00000413232 WFDC8Q8IUA0 241 aa17.12■□□□□ 0.33
CPSF7-204ENST00000413232 RIMKLAQ8IXN7 391 aa17.12■□□□□ 0.33
CPSF7-204ENST00000413232 OR5AK3PQ8NH89 298 aa17.12■□□□□ 0.33
CPSF7-204ENST00000413232 GPR119Q8TDV5 335 aa17.12■□□□□ 0.33
CPSF7-204ENST00000413232 RNF128Q8TEB7 428 aa17.12■□□□□ 0.33
CPSF7-204ENST00000413232 TMEM204Q9BSN7 226 aa17.12■□□□□ 0.33
CPSF7-204ENST00000413232 SERHL2Q9H4I8 314 aa17.12■□□□□ 0.33
CPSF7-204ENST00000413232 COQ10BQ9H8M1 238 aa17.12■□□□□ 0.33
CPSF7-204ENST00000413232 L2HGDHQ9H9P8 463 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms