RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 RPH3AQ9Y2J0 694 aaPredicted RBP11.92□□□□□ -0.5
HDAC8-210ENST00000412342 A0A087WZY1 265 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 OR2M5A3KFT3 312 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 GMNCA6NCL1 334 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 AGAP5A6NIR3 686 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 FIGNL2A6NMB9 653 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 SHISA8B8ZZ34 492 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 FXYD1O00168 92 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 SLC22A2O15244 555 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 HCRTR2O43614 444 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 GMFGO60234 142 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 SNX3O60493 162 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 BCHEP06276 602 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 LINGO3P0C6S8 592 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 UBL4AP11441 157 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 CPN1P15169 458 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 ZNF708P17019 499 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 GPX2P18283 190 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 TCEA1P23193 301 aaKnown RBP11.91□□□□□ -0.5
HDAC8-210ENST00000412342 PGM1P36871 562 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 STARP49675 285 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 P2RX1P51575 399 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 SUMO3P55854 103 aaPredicted RBP11.91□□□□□ -0.5
HDAC8-210ENST00000412342 PER3P56645 1201 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 CLDN15P56746 228 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 GNGT1P63211 74 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 HPCAP84074 193 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 SELPLGQ14242 412 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 PLPPR5Q32ZL2 321 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 COQ5Q5HYK3 327 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 C1orf185Q5T7R7 199 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 ZNF585AQ6P3V2 769 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 SEM1Q6ZVN7 128 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 HMGN2P46Q86SG4 172 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 ZNF614Q8N883 585 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 OR5M1Q8NGP8 315 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 POC1BQ8TC44 478 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 MAL2Q969L2 176 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 ARSGQ96EG1 525 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 DTNBP1Q96EV8 351 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 TMEM19Q96HH6 336 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 ANKRD27Q96NW4 1050 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 CGREF1Q99674 301 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 ELAC2Q9BQ52 826 aaKnown RBP11.91□□□□□ -0.5
HDAC8-210ENST00000412342 TRIM8Q9BZR9 551 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 RAD21L1Q9H4I0 556 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 A4GALTQ9NPC4 353 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 THUMPD1Q9NXG2 353 aaKnown RBP11.91□□□□□ -0.5
HDAC8-210ENST00000412342 ARMCX1Q9P291 453 aa11.91□□□□□ -0.5
HDAC8-210ENST00000412342 UTP20O75691 2785 aaKnown RBP11.91□□□□□ -0.5
HDAC8-210ENST00000412342 ASH1LQ9NR48 2969 aaKnown RBP11.91□□□□□ -0.5
HDAC8-210ENST00000412342 ICE1Q9Y2F5 2266 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 CLDN24A6NM45 220 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 H3BNH8 94 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 ETV2O00321 342 aaPredicted RBP11.9□□□□□ -0.5
HDAC8-210ENST00000412342 ZNF264O43296 627 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 EIF4E2O60573 245 aaKnown RBP11.9□□□□□ -0.5
HDAC8-210ENST00000412342 ADAM11O75078 769 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 NTN1O95631 604 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 GLI4P10075 376 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 ARAFP10398 606 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 NR2F1P10589 423 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 ESRRAP11474 423 aaPredicted RBP11.9□□□□□ -0.5
HDAC8-210ENST00000412342 GABRA1P14867 456 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 ZNF17P17021 662 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 PPIBP23284 216 aaKnown RBP11.9□□□□□ -0.5
HDAC8-210ENST00000412342 NUP107P57740 925 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 CDSNQ15517 529 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 TOMM34Q15785 309 aaPredicted RBP11.9□□□□□ -0.5
HDAC8-210ENST00000412342 ADRM1Q16186 407 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 ACSF3Q4G176 576 aaPredicted RBP11.9□□□□□ -0.5
HDAC8-210ENST00000412342 RPS26P11Q5JNZ5 115 aaPredicted RBP11.9□□□□□ -0.5
HDAC8-210ENST00000412342 RAET1LQ5VY80 246 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 REP15Q6BDI9 236 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 MTFR2Q6P444 385 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 RPTNQ6XPR3 784 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 ADGRE4PQ86SQ3 457 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 SNX32Q86XE0 403 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 TREML1Q86YW5 311 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 GTPBP8Q8N3Z3 284 aaPredicted RBP11.9□□□□□ -0.5
HDAC8-210ENST00000412342 TOR1AIP2Q8NFQ8 470 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 GPR119Q8TDV5 335 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 PMM1Q92871 262 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 ZBTB8AQ96BR9 441 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 TREX2Q9BQ50 279 aaPredicted RBP11.9□□□□□ -0.5
HDAC8-210ENST00000412342 TTYH2Q9BSA4 534 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 CCDC106Q9BWC9 280 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 RSPO3Q9BXY4 272 aaPredicted RBP11.9□□□□□ -0.5
HDAC8-210ENST00000412342 LAT2Q9GZY6 243 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 MYLK2Q9H1R3 596 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 MTHFD2LQ9H903 347 aaPredicted RBP11.9□□□□□ -0.5
HDAC8-210ENST00000412342 BCL2L10Q9HD36 194 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 VDAC3Q9Y277 283 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 ZNF337Q9Y3M9 751 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 CHST2Q9Y4C5 530 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 CAPN7Q9Y6W3 813 aa11.9□□□□□ -0.5
HDAC8-210ENST00000412342 DOCK7Q96N67 2140 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 SPTBN1Q01082 2364 aaKnown RBP11.89□□□□□ -0.51
HDAC8-210ENST00000412342 HECTD1Q9ULT8 2610 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 AHRRA9YTQ3 701 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms