RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 PRIM2P49643 509 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 MANFP55145 182 aaKnown RBP12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 DUSP5Q16690 384 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 PGGHGQ32M88 737 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 DNM1P46Q6ZS02 220 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 FCRLAQ7L513 359 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 MISPQ8IVT2 679 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 BANPQ8N9N5 519 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 PIWIL2Q8TC59 973 aaKnown RBP12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 KISS1RQ969F8 398 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CPNE4Q96A23 557 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 GIMAP5Q96F15 307 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 C16orf58Q96GQ5 468 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 HS6ST2Q96MM7 605 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 SRXN1Q9BYN0 137 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 IQCGQ9H095 443 aaKnown RBP12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 KLHL13Q9P2N7 655 aa12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 GDF2Q9UK05 429 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB2-229ENST00000411527 MXRA5Q9NR99 2828 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 A0A1W2PQD3 144 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 DPRXA6NFQ7 191 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 AKAP10O43572 662 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 YES1P07947 543 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 THBS1P07996 1170 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ALOX5P09917 674 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 PYGBP11216 843 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 LCN1P31025 176 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 SERPINB4P48594 390 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 FOXF1Q12946 379 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ITGADQ13349 1161 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 KIAA0040Q15053 153 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 P2RY6Q15077 328 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CD226Q15762 336 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 TMEM176BQ3YBM2 270 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CHRFAM7AQ494W8 412 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ZNF385BQ569K4 471 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CCNJQ5T5M9 372 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 DNAJC14Q6Y2X3 702 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 BHLHA15Q7RTS1 189 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 COX18Q8N8Q8 333 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ZFP28Q8NHY6 868 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 FBXO27Q8NI29 283 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 PHOSPHO1Q8TCT1 267 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 TMEM158Q8WZ71 300 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 PPCDCQ96CD2 204 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CCDC126Q96EE4 140 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 OTUB1Q96FW1 271 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 MS4A4EQ96PG1 132 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 TRAF4Q9BUZ4 470 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 TRIM2Q9C040 744 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ALG2Q9H553 416 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 LRTM1Q9HBL6 345 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 GP6Q9HCN6 339 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CISD1Q9NZ45 108 aaKnown RBP12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 SH3BP4Q9P0V3 963 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 NTMQ9P121 344 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CCL27Q9Y4X3 112 aa12.65□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CADP27708 2225 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 STAB1Q9NY15 2570 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 A8MV72 311 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ZNF814B7Z6K7 855 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 G3V2L1 256 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ZNF195O14628 629 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 GPRIN2O60269 458 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 RAMP1O60894 148 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 NUDT14O95848 222 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 CD8AP01732 235 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 MYL2P10916 166 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ELK4P28324 431 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 POU6F2P78424 691 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ZNF117Q03924 483 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 SEZ6L2Q6UXD5 910 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ATP6V1C2Q8NEY4 427 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ACMSDQ8TDX5 336 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 JADE3Q92613 823 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 CHMP6Q96FZ7 201 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 METTL2AQ96IZ6 378 aaKnown RBP12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 USB1Q9BQ65 265 aaKnown RBP12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 POTEKPQ9BYX7 375 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 REEP4Q9H6H4 257 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 BARX1Q9HBU1 254 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 TNFRSF12AQ9NP84 129 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 C1orf109Q9NX04 203 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 DCDC2Q9UHG0 476 aa12.64□□□□□ -0.39
HLA-DQB2-229ENST00000411527 IGHV3-15A0A0B4J1V0 119 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 GJE1A6NN92 205 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 H3BQF6 201 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 OIP5O43482 229 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 SSX4O60224 188 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 TBX19O60806 448 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 LYZL6O75951 148 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 URI1O94763 535 aaPredicted RBP12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 HSPA4LO95757 839 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ABHD2P08910 425 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 UROSP10746 265 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 EFNA1P20827 205 aaPredicted RBP12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 PTNP21246 168 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ENPP1P22413 925 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 PRPH2P23942 346 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 FRKP42685 505 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms