RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 CENPSQ8N2Z9 138 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 Q8N976 141 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 TRUB1Q8WWH5 349 aaKnown RBP0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 ADIPOR1Q96A54 375 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 CCDC51Q96ER9 411 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 LINC00477Q96M19 166 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 CCDC114Q96M63 670 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 KCNA7Q96RP8 456 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 CACNG6Q9BXT2 260 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 TEX13AQ9BXU3 409 aaPredicted RBP0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 SRXN1Q9BYN0 137 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 POLR2J2Q9GZM3 115 aaKnown RBP0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 NAPBQ9H115 298 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 POLR2J3Q9H1A7 115 aaKnown RBP0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 CDC42EP4Q9H3Q1 356 aaKnown RBP0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 DMAP1Q9NPF5 467 aaPredicted RBP0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 ZCCHC3Q9NUD5 404 aaKnown RBP0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 AIG1Q9NVV5 245 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 DUS2Q9NX74 493 aaKnown RBP0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 UTP6Q9NYH9 597 aaKnown RBP0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 CNIH4Q9P003 139 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 NDUFA13Q9P0J0 144 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 DEC1Q9P2X7 70 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 NARFQ9UHQ1 456 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 XPO7Q9UIA9 1087 aaKnown RBP0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 GGA2Q9UJY4 613 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 ANGPTL2Q9UKU9 493 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 ITM2BQ9Y287 266 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 TRAPPC4Q9Y296 219 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 ZSWIM8A7E2V4 1837 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 GRIN2DO15399 1336 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 SVILO95425 2214 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 IQANK1A0A1B0GTG1 560 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 SLC28A1O00337 649 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 RAMP1O60894 148 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 ENTPD5O75356 428 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 CBR3O75828 277 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 AKAP3O75969 853 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 APOA4P06727 396 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 LDHCP07864 332 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 GIPP09681 153 aaPredicted RBP0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 HIST1H2AGP0C0S8 130 aaPredicted RBP0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 CHTF8P0CG12 524 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 CRISP2P16562 243 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 PRDX3P30048 256 aaKnown RBP0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 PSMD8P48556 350 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 CCL11P51671 97 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 CASP9P55211 416 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 TGFBR3Q03167 851 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 ZP4Q12836 540 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 SRSF5Q13243 272 aaKnown RBP0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 KBTBD12Q3ZCT8 623 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 HECTD3Q5T447 861 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 METTL11BQ5VVY1 283 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 RAET1LQ5VY80 246 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 HIST2H2AA3Q6FI13 130 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 TOM1L2Q6ZVM7 507 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 PRSS42Q7Z5A4 293 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 HIST2H2ABQ8IUE6 130 aaPredicted RBP0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 OSR2Q8N2R0 312 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 MLKLQ8NB16 471 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 ATAD1Q8NBU5 361 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 OR9A1PQ8NGU1 263 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 ACER1Q8TDN7 264 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 PAQR8Q8TEZ7 354 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 ESR2Q92731 530 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 HIST1H2ACQ93077 130 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 COL21A1Q96P44 957 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 TSG101Q99816 390 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 OSBPL11Q9BXB4 747 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 RNPEPL1Q9HAU8 725 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 EML4Q9HC35 981 aaKnown RBP0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 GNPTGQ9UJJ9 305 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 PLA2G4CQ9UP65 541 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 FOXA2Q9Y261 457 aaPredicted RBP0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 MRPS2Q9Y399 296 aaKnown RBP0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 UBIAD1Q9Y5Z9 338 aa0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 KMT2BQ9UMN6 2715 aaPredicted RBP0.44□□□□□ -2.34
RNU2-55P-201ENST00000411146 PHF3Q92576 2039 aaKnown RBP0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 C13orf42A0A1B0GVH6 325 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 TMEM89A2RUT3 159 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 TMEM110-MUSTN1A8MSY1 372 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 IDSB3KWA1 339 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 CASKO14936 926 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 ANGPTL7O43827 346 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 CD5LO43866 347 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 DKC1O60832 514 aaKnown RBP eCLIP0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 RCBTB2O95199 551 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 SNAPINO95295 136 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 SYNGR4O95473 234 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 HSPA4LO95757 839 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 C6orf47O95873 294 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 CSF2P04141 144 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 ALPPP05187 535 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 SFTPBP07988 381 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 PLEKP08567 350 aaPredicted RBP0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 P0C880 135 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 NPY1RP25929 384 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 NMUP48645 174 aa0.43□□□□□ -2.34
RNU2-55P-201ENST00000411146 SH3BGRP55822 239 aaPredicted RBP0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms