RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 AKAP7Q9P0M2 348 aaPredicted RBP5.09□□□□□ -1.6
EPHA4-202ENST00000409854 COPS7AQ9UBW8 275 aa5.09□□□□□ -1.6
EPHA4-202ENST00000409854 REV1Q9UBZ9 1251 aa5.09□□□□□ -1.6
EPHA4-202ENST00000409854 ATPIF1Q9UII2 106 aa5.09□□□□□ -1.6
EPHA4-202ENST00000409854 MYRFQ9Y2G1 1151 aa5.09□□□□□ -1.6
EPHA4-202ENST00000409854 OR10H1Q9Y4A9 318 aa5.09□□□□□ -1.6
EPHA4-202ENST00000409854 PCSK5Q92824 1860 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 hCG_2014768A0A024R1R8 64 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 LINC00854A0A1B0GVQ3 168 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 CPSF4LA6NMK7 179 aaKnown RBP5.08□□□□□ -1.6
EPHA4-202ENST00000409854 C4orf47A7E2U8 309 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 TP53P04637 393 aaPredicted RBP5.08□□□□□ -1.6
EPHA4-202ENST00000409854 CCNYL3P0C7X3 344 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 PRG2P13727 222 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 EPHA2P29317 976 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 ACAA2P42765 397 aaKnown RBP5.08□□□□□ -1.6
EPHA4-202ENST00000409854 NUP107P57740 925 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 ALDH6A1Q02252 535 aaKnown RBP5.08□□□□□ -1.6
EPHA4-202ENST00000409854 RAPSNQ13702 412 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 NNATQ16517 81 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 CTU2Q2VPK5 515 aaKnown RBP5.08□□□□□ -1.6
EPHA4-202ENST00000409854 FGD3Q5JSP0 725 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 FCRLBQ6BAA4 426 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 CPEB2Q7Z5Q1 589 aaKnown RBP5.08□□□□□ -1.6
EPHA4-202ENST00000409854 CCDC71Q8IV32 467 aaPredicted RBP5.08□□□□□ -1.6
EPHA4-202ENST00000409854 LSMEM1Q8N8F7 131 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 SETD9Q8NE22 299 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 NUBPLQ8TB37 319 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF566Q969W8 418 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 RNF31Q96EP0 1072 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 SLC41A3Q96GZ6 507 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 PRSS27Q9BQR3 290 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 MRPS26Q9BYN8 205 aaKnown RBP5.08□□□□□ -1.6
EPHA4-202ENST00000409854 ULBP3Q9BZM4 244 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 MRTO4Q9UKD2 239 aaKnown RBP5.08□□□□□ -1.6
EPHA4-202ENST00000409854 PCDHGA3Q9Y5H0 932 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 A0A087WUU8 490 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 A0A1W2PQD3 144 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 TRAPPC13A5PLN9 417 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 SERINC4A6NH21 518 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 AGRPO00253 132 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 KLF4O43474 513 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 KLF7O75840 302 aaPredicted RBP5.08□□□□□ -1.6
EPHA4-202ENST00000409854 KLK3P07288 261 aaPredicted RBP5.08□□□□□ -1.6
EPHA4-202ENST00000409854 UMODP07911 640 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 CDK4P11802 303 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 ITIH1P19827 911 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 TBXA2RP21731 343 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 GGT2P36268 569 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 ESRRGP62508 458 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 RNF4P78317 190 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 TEKQ02763 1124 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 CD47Q08722 323 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 NCF4Q15080 339 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 DCAF12Q5T6F0 453 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF613Q6PF04 617 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 TTC33Q6PID6 262 aaPredicted RBP5.08□□□□□ -1.6
EPHA4-202ENST00000409854 PLEKHM3Q6ZWE6 761 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 SLC29A4Q7RTT9 530 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 SLC34A3Q8N130 599 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 OR4K5Q8NGD3 323 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 OR4C3Q8NH37 302 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 METTL21AQ8WXB1 218 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 ACOT11Q8WXI4 607 aaPredicted RBP5.08□□□□□ -1.6
EPHA4-202ENST00000409854 CNOT9Q92600 299 aaKnown RBP5.08□□□□□ -1.6
EPHA4-202ENST00000409854 HDAC2Q92769 488 aaKnown RBP5.08□□□□□ -1.6
EPHA4-202ENST00000409854 SLC38A4Q969I6 547 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 TAAR9Q96RI9 348 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF559Q9BR84 538 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 MESP1Q9BRJ9 268 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 CRB3Q9BUF7 120 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 PRR14Q9BWN1 585 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF556Q9HAH1 456 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 EXOSC3Q9NQT5 275 aaKnown RBP5.08□□□□□ -1.6
EPHA4-202ENST00000409854 UBQLN4Q9NRR5 601 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 C19orf25Q9UFG5 118 aaPredicted RBP5.08□□□□□ -1.6
EPHA4-202ENST00000409854 SLC35A3Q9Y2D2 325 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 NTNG1Q9Y2I2 539 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 PCDHGA6Q9Y5G7 932 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 B3GALT1Q9Y5Z6 326 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 COMMD3-BMI1R4GMX3 469 aa5.08□□□□□ -1.6
EPHA4-202ENST00000409854 A0A0B4J2E0 115 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 A0A1B0GX12 115 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 A0A1W2PNU3 283 aaPredicted RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 ZAR1LA6NP61 321 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 FOXD2O60548 495 aaPredicted RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 ABCB7O75027 752 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 ADAM11O75078 769 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 CSO75390 466 aaKnown RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF254O75437 659 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 OSMP13725 252 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 MMP11P24347 488 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 IFNA8P32881 189 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 GSSP48637 474 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 PNLIPRP2P54317 469 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 UGT2B15P54855 530 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 SLC26A5P58743 744 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 RPP38P78345 283 aaKnown RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 HOXC5Q00444 222 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 EIF3IQ13347 325 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms