RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 BCL7AQ4VC05 210 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 LDLRAP1Q5SW96 308 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 RAET1GQ6H3X3 334 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 KDM7AQ6ZMT4 941 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 GCNT7Q6ZNI0 430 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 TAS2R42Q7RTR8 314 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 CCDC91Q7Z6B0 441 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 MTERF4Q7Z6M4 381 aaKnown RBP3.81□□□□□ -1.8
CLK1-203ENST00000409769 ABI3BPQ7Z7G0 1075 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 CMC1Q7Z7K0 106 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 ISCA2Q86U28 154 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 LCA5Q86VQ0 697 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 ZNF547Q8IVP9 402 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 CENPLQ8N0S6 344 aaPredicted RBP3.81□□□□□ -1.8
CLK1-203ENST00000409769 KRT222Q8N1A0 295 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 C4orf33Q8N1A6 199 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 OTUD6BQ8N6M0 293 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 TMEM105Q8N8V8 129 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 GPATCH11Q8N954 259 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 OR1J1Q8NGS3 322 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 CD200R1Q8TD46 325 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 GRHL3Q8TE85 626 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 GANCQ8TET4 914 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 NAT14Q8WUY8 206 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 RLN3Q8WXF3 142 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 ATXN7L3BQ96GX2 97 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 CABS1Q96KC9 395 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 LRR1Q96L50 414 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 BMFQ96LC9 184 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 LINC00615Q96LM1 132 aaPredicted RBP3.81□□□□□ -1.8
CLK1-203ENST00000409769 MS4A10Q96PG2 267 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 PANX3Q96QZ0 392 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 COPS8Q99627 209 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 PSD2Q9BQI7 771 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 PTTG2Q9NZH5 202 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 BCCIPQ9P287 314 aaKnown RBP eCLIP3.81□□□□□ -1.8
CLK1-203ENST00000409769 TXNDC16Q9P2K2 825 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 ATXN10Q9UBB4 475 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 GALPQ9UBC7 116 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 IL17BQ9UHF5 180 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 GNPTGQ9UJJ9 305 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 EMCNQ9ULC0 261 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 PCDHGB4Q9UN71 923 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 SLC17A4Q9Y2C5 497 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 DHRS7Q9Y394 339 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 PCYT1BQ9Y5K3 369 aaPredicted RBP3.81□□□□□ -1.8
CLK1-203ENST00000409769 SLCO1B1Q9Y6L6 691 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 HEATR5BQ9P2D3 2071 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 CACNA1HO95180 2353 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 BPTFQ12830 3046 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 BDP1A6H8Y1 2624 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 PCDH15Q96QU1 1955 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 IGLV9-49A0A0B4J1Y8 123 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 IGHV4-61A0A0C4DH41 118 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 SLC5A10A0PJK1 596 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 FEZF1A0PJY2 475 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 TMEM120BA0PK00 339 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 ANKUB1A6NFN9 424 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 FAM47DPA6NHR8 397 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 PRAMEF26H0Y7S4 382 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 TM9SF1O15321 606 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 INPP4BO15327 924 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 ATP6V0E1O15342 81 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 SLC31A1O15431 190 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 XRCC3O43542 346 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 VEGFDO43915 354 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 GLRA3O75311 464 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 SPAG7O75391 227 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 VPS26AO75436 327 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 PRKRAO75569 313 aaKnown RBP3.8□□□□□ -1.8
CLK1-203ENST00000409769 RHOBTB1O94844 696 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 SLCO2B1O94956 709 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 KLHL2O95198 593 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 SLC25A14O95258 325 aaPredicted RBP3.8□□□□□ -1.8
CLK1-203ENST00000409769 IGHV4-59P01825 116 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 PCCBP05166 539 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 GSTA1P08263 222 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 OR2T7P0C7T2 308 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 OR56A5P0C7T3 313 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 CD1DP15813 335 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 BCKDHBP21953 392 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 HNRNPA2B1P22626 353 aaKnown RBP3.8□□□□□ -1.8
CLK1-203ENST00000409769 CRABP2P29373 138 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 MAT2AP31153 395 aaKnown RBP3.8□□□□□ -1.8
CLK1-203ENST00000409769 RPA3P35244 121 aaPredicted RBP3.8□□□□□ -1.8
CLK1-203ENST00000409769 SLC9A3P48764 834 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 CX3CL1P78423 397 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 SGCGQ13326 291 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 HSP90B2PQ58FF3 399 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 IGSF11Q5DX21 431 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 TPRG1LQ5T0D9 272 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 GARNL3Q5VVW2 1013 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 UGT3A1Q6NUS8 523 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 TEX38Q6PEX7 206 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 TMEM220Q6QAJ8 160 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 FAM198BQ6UWH4 519 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 CYHR1Q6ZMK1 362 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 CLDN19Q8N6F1 224 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 RASGEF1AQ8N9B8 481 aa3.8□□□□□ -1.8
CLK1-203ENST00000409769 SIDT2Q8NBJ9 832 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms