RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 WFDC11Q8NEX6 87 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 ADAMTS15Q8TE58 950 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 C1orf50Q9BV19 199 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 KLHL4Q9C0H6 718 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 BHLHE41Q9C0J9 482 aaPredicted RBP13.22□□□□□ -0.29
CBX3-203ENST00000409747 TIGARQ9NQ88 270 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 FBXO34Q9NWN3 711 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 GJE1A6NN92 205 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 TNFSF11O14788 317 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 CXCL13O43927 109 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 SMPD2O60906 423 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 SKAP2O75563 359 aaPredicted RBP13.21□□□□□ -0.3
CBX3-203ENST00000409747 ADH6P28332 368 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 VSNL1P62760 191 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 CD226Q15762 336 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 EXOC3L2Q2M3D2 409 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 DCST2Q5T1A1 773 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 IL23RQ5VWK5 629 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 C20orf204Q6ZNR8 217 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 ZNF550Q7Z398 422 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 BIVMQ86UB2 503 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 CXorf67Q86X51 503 aaPredicted RBP13.21□□□□□ -0.3
CBX3-203ENST00000409747 LRRC75A-AS1Q8N1F1 130 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 PHOSPHO1Q8TCT1 267 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 TUBGCP3Q96CW5 907 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 COQ8BQ96D53 544 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 POM121Q96HA1 1249 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 REXO5Q96IC2 774 aaKnown RBP13.21□□□□□ -0.3
CBX3-203ENST00000409747 KLHL15Q96M94 604 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 GIMAP2Q9UG22 337 aa13.21□□□□□ -0.3
CBX3-203ENST00000409747 SIAH2O43255 324 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 NUDT14O95848 222 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 C6orf47O95873 294 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 TUBBP07437 444 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 BPGMP07738 259 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 LINGO3P0C6S8 592 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 P2RX1P51575 399 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 ZNF117Q03924 483 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 ACKR1Q16570 336 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 BEND4Q6ZU67 534 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 P3H2Q8IVL5 708 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 LILRA2Q8N149 483 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 PPP1R14CQ8TAE6 165 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 CPNE4Q96A23 557 aaPredicted RBP13.2□□□□□ -0.3
CBX3-203ENST00000409747 ZC3HAV1LQ96H79 300 aaKnown RBP13.2□□□□□ -0.3
CBX3-203ENST00000409747 C18orf12Q96KH6 178 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 ZIM3Q96PE6 472 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 CCL19Q99731 98 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 TMEM185BQ9H7F4 350 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 CXorf36Q9H7Y0 433 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 UBTD1Q9HAC8 227 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 ZDHHC2Q9UIJ5 367 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 ACTL7BQ9Y614 415 aa13.2□□□□□ -0.3
CBX3-203ENST00000409747 GPC6Q9Y625 555 aaPredicted RBP13.2□□□□□ -0.3
CBX3-203ENST00000409747 CFLARO15519 480 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 CARD18P57730 90 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 C21orf58P58505 322 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 FOXF1Q12946 379 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 SMU1Q2TAY7 513 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 BEX5Q5H9J7 111 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 POC1BQ8TC44 478 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 C3orf30Q96M34 536 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 DUSP26Q9BV47 211 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 OR10A4Q9H209 315 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 GPATCH2Q9NW75 528 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 NOP53Q9NZM5 478 aaKnown RBP13.19□□□□□ -0.3
CBX3-203ENST00000409747 CLEC4AQ9UMR7 237 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 ACANP16112 2415 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 A0A0J9YW62 118 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 GTPBP1O00178 669 aaKnown RBP13.19□□□□□ -0.3
CBX3-203ENST00000409747 SFTPDP35247 375 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 SOAT1P35610 550 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 ATP12AP54707 1039 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 NR1H2P55055 460 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 RNPS1Q15287 305 aaKnown RBP13.19□□□□□ -0.3
CBX3-203ENST00000409747 KLHL26Q53HC5 615 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 RIMKLAQ8IXN7 391 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 KRTCAP2Q8N6L1 136 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 AENQ8WTP8 325 aaKnown RBP13.19□□□□□ -0.3
CBX3-203ENST00000409747 OSTF1Q92882 214 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 MARK4Q96L34 752 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 NPAS1Q99742 590 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 ASIC5Q9NY37 505 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 DTNAQ9Y4J8 743 aa13.19□□□□□ -0.3
CBX3-203ENST00000409747 DUXAA6NLW8 204 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 FAM171A2A8MVW0 826 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 TYROBPO43914 113 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 SNUPNO95149 360 aaKnown RBP13.18□□□□□ -0.3
CBX3-203ENST00000409747 AK1P00568 194 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 OPN1LWP04000 364 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 AGTR1P30556 359 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 ADSLP30566 484 aaPredicted RBP13.18□□□□□ -0.3
CBX3-203ENST00000409747 ARRB2P32121 409 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 EMX2Q04743 252 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 ZNF239Q16600 458 aaKnown RBP13.18□□□□□ -0.3
CBX3-203ENST00000409747 Q5PR19 223 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 TMEM201Q5SNT2 666 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 ANKRD34AQ69YU3 496 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 STAC2Q6ZMT1 411 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 KRTAP1-3Q8IUG1 177 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms