RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, human

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA1-205	ENST00000409542	GABARAPL1	Q9H0R8	117 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	TOR3A	Q9H497	397 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	EHD1	Q9H4M9	534 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	LDAH	Q9H6V9	325 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	PELI2	Q9HAT8	420 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	CORO2B	Q9UQ03	480 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ATG4B	Q9Y4P1	393 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	KCNE2	Q9Y6J6	123 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	KIAA1549	Q9HCM3	1950 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	CLIC1	O00299	241 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	FOXE1	O00358	373 aa	Predicted RBP	11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	CYR61	O00622	381 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	JUNB	P17275	347 aa	Predicted RBP	11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	HSD17B7	P56937	341 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	RAE1	P78406	368 aa	Known RBP	11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	IL18R1	Q13478	541 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	VMAC	Q2NL98	169 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	FLYWCH1	Q4VC44	716 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	MED27	Q6P2C8	311 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	GALNT18	Q6P9A2	607 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	HSDL2	Q6YN16	418 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	RTL4	Q6ZR62	310 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	BIVM	Q86UB2	503 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	PRIMA1	Q86XR5	153 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	RNF175	Q8N4F7	328 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	HDAC2	Q92769	488 aa	Known RBP	11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	COQ8B	Q96D53	544 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	MS4A6E	Q96DS6	147 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	MUS81	Q96NY9	551 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	PANX1	Q96RD7	426 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	MDFI	Q99750	246 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	AIF1L	Q9BQI0	150 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	EFCAB11	Q9BUY7	163 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	PROK2	Q9HC23	129 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ADAP2	Q9NPF8	381 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	FAM118A	Q9NWS6	357 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	RPS6KA6	Q9UK32	745 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	DYRK1B	Q9Y463	629 aa		11.62	□□□□□ -0.55
CHRNA1-205	ENST00000409542	FREM3	P0C091	2139 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	TRGV5	A0A0B4J1U4	118 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SEMG1	P04279	462 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	IFNA16	P05015	189 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	HOXC12	P31275	282 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	TIA1	P31483	386 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	RPS6KA3	P51812	740 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	GABARAPL2	P60520	117 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	TOP3A	Q13472	1001 aa	Predicted RBP	11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	DDX39B	Q13838	428 aa	Known RBP	11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	VEZF1	Q14119	521 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ELAVL1	Q15717	326 aa	Known RBP	11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	DEFB113	Q30KQ7	82 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ZIK1	Q3SY52	487 aa	Predicted RBP	11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	PAGE2B	Q5JRK9	111 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	CPTP	Q5TA50	214 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ADNP2	Q6IQ32	1131 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SHQ1	Q6PI26	577 aa	Known RBP	11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ZDHHC21	Q8IVQ6	265 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	LAS2	Q8IYD9	372 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	C1orf52	Q8N6N3	182 aa	Known RBP	11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	VPS37A	Q8NEZ2	397 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	HUS1B	Q8NHY5	278 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	GFM2	Q969S9	779 aa	Known RBP	11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	GAL3ST3	Q96A11	431 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SARAF	Q96BY9	339 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	MTERF1	Q99551	399 aa	Known RBP	11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	DOK1	Q99704	481 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	DUSP26	Q9BV47	211 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ALOXE3	Q9BYJ1	711 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SLC6A15	Q9H2J7	730 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	PLEKHF2	Q9H8W4	249 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SMURF2	Q9HAU4	748 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SACM1L	Q9NTJ5	587 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ATP6V1H	Q9UI12	483 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	UTS2R	Q9UKP6	389 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	TSC22D4	Q9Y3Q8	395 aa		11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.61	□□□□□ -0.55
CHRNA1-205	ENST00000409542	LRIT2	A6NDA9	550 aa		11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SLC16A6	O15403	523 aa		11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ERI3	O43414	337 aa	Known RBP	11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ETHE1	O95571	254 aa		11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	RAF1	P04049	648 aa		11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ABCB1	P08183	1280 aa	Predicted RBP	11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ANXA4	P09525	319 aa	Predicted RBP	11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	C1GALT1C1L	P0DN25	315 aa		11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	LAMP1	P11279	417 aa		11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	BMP5	P22003	454 aa		11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	CERS1	P27544	350 aa		11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	DCK	P27707	260 aa		11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	PCSK6	P29122	969 aa		11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	PLA2G16	P53816	162 aa		11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	RAD23A	P54725	363 aa		11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	LIM2	P55344	173 aa		11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	RNF4	P78317	190 aa		11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	LAPTM5	Q13571	262 aa		11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	DAZAP2	Q15038	168 aa	Predicted RBP	11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	EIF3M	Q7L2H7	374 aa	Known RBP	11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	VN1R5	Q7Z5H4	357 aa		11.6	□□□□□ -0.55
CHRNA1-205	ENST00000409542	PTOV1	Q86YD1	416 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms