RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 MIXL1Q9H2W2 232 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 SFXN1Q9H9B4 322 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 LSM2Q9Y333 95 aaKnown RBP12.49□□□□□ -0.41
COL6A2-204ENST00000409416 A0A0B4J203 849 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 GXYLT2A0PJZ3 443 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 TBX6O95947 436 aaPredicted RBP12.48□□□□□ -0.41
COL6A2-204ENST00000409416 BCL2A1Q16548 175 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 DEFB133Q30KQ1 61 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 ASPGQ86U10 573 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 LRRC56Q8IYG6 542 aaPredicted RBP12.48□□□□□ -0.41
COL6A2-204ENST00000409416 REM2Q8IYK8 340 aaPredicted RBP12.48□□□□□ -0.41
COL6A2-204ENST00000409416 OR13C5Q8NGS8 318 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 OR13C2Q8NGS9 318 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 ST6GAL2Q96JF0 529 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 DCLRE1CQ96SD1 692 aaKnown RBP12.48□□□□□ -0.41
COL6A2-204ENST00000409416 SPATA5L1Q9BVQ7 753 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 C1QTNF7Q9BXJ2 289 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 SLCO1B1Q9Y6L6 691 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 TRAV6A0A075B6T7 132 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 P2RX6O15547 441 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 HOXC11O43248 304 aaPredicted RBP12.48□□□□□ -0.41
COL6A2-204ENST00000409416 MSL3P1P0C860 447 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 PIPP12273 146 aaPredicted RBP12.48□□□□□ -0.41
COL6A2-204ENST00000409416 ATF4P18848 351 aaPredicted RBP12.48□□□□□ -0.41
COL6A2-204ENST00000409416 TRHRP34981 398 aaPredicted RBP12.48□□□□□ -0.41
COL6A2-204ENST00000409416 MLLT3P42568 568 aaPredicted RBP12.48□□□□□ -0.41
COL6A2-204ENST00000409416 CTBP2P56545 445 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 UBE3DQ7Z6J8 389 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 KIF18BQ86Y91 864 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 RASGRP3Q8IV61 690 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 SERPINA12Q8IW75 414 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 OR4K14Q8NGD5 310 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 AP3S1Q92572 193 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 ZNF717Q9BY31 904 aaPredicted RBP12.48□□□□□ -0.41
COL6A2-204ENST00000409416 RNF121Q9H920 327 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 TEKT2Q9UIF3 430 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 MKL2Q9ULH7 1088 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 PCDHGB2Q9Y5G2 931 aa12.48□□□□□ -0.41
COL6A2-204ENST00000409416 IGKV1-8A0A0C4DH67 115 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 C11orf98E9PRG8 122 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 CTSVO60911 334 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 PYCR1P32322 319 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 BNC1Q01954 994 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 STK11Q15831 433 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 TATDN3Q17R31 274 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 LYPD4Q6UWN0 246 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 ETFBKMTQ8IXQ9 262 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 OR52L1Q8NGH7 329 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 OR8D4Q8NGM9 314 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 ZNF671Q8TAW3 534 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 LMX1AQ8TE12 382 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 SPRYD4Q8WW59 207 aaPredicted RBP12.47□□□□□ -0.41
COL6A2-204ENST00000409416 MS4A6EQ96DS6 147 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 POLDIP3Q9BY77 421 aaKnown RBP12.47□□□□□ -0.41
COL6A2-204ENST00000409416 PLEKHB1Q9UF11 243 aaPredicted RBP12.47□□□□□ -0.41
COL6A2-204ENST00000409416 DIMT1Q9UNQ2 313 aaKnown RBP12.47□□□□□ -0.41
COL6A2-204ENST00000409416 SPACA6W5XKT8 324 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 DAPL1A0PJW8 107 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 ARHGEF9O43307 516 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 HCRTR1O43613 425 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 PAHP00439 452 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 FBXO45P0C2W1 286 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 KIR2DL3P43628 341 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 MAP2K3P46734 347 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 OR1D4P47884 311 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 ADPRHP54922 357 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 CRYZQ08257 329 aaKnown RBP12.47□□□□□ -0.41
COL6A2-204ENST00000409416 MRPL28Q13084 256 aaKnown RBP12.47□□□□□ -0.41
COL6A2-204ENST00000409416 DUSP5Q16690 384 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 ESPNLQ6ZVH7 1005 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 CDK20Q8IZL9 346 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 VWA5B2Q8N398 1253 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 TMIEQ8NEW7 156 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 SDR9C7Q8NEX9 313 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 LHX9Q9NQ69 397 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 BDP1A6H8Y1 2624 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 TRANK1O15050 2925 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 DOCK7Q96N67 2140 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 SLC9B1P1A6NJY1 282 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 C17orf51A8MQB3 221 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 B4DXG7 233 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 H0YGG7 62 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 PPP1R3DO95685 299 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 LALBAP00709 142 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 PRKAR1AP10644 381 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 BLVRAP53004 296 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 ARF3P61204 181 aaPredicted RBP12.47□□□□□ -0.41
COL6A2-204ENST00000409416 TEKQ02763 1124 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 SNTA1Q13424 505 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 ABHD17CQ6PCB6 329 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 BHLHB9Q6PI77 547 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 LNX2Q8N448 690 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 SPERTQ8NA61 448 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 GALNT6Q8NCL4 622 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 GCDHQ92947 438 aaPredicted RBP12.47□□□□□ -0.41
COL6A2-204ENST00000409416 WDR34Q96EX3 536 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 AHCYL2Q96HN2 611 aaKnown RBP12.47□□□□□ -0.41
COL6A2-204ENST00000409416 MSLNLQ96KJ4 702 aa12.47□□□□□ -0.41
COL6A2-204ENST00000409416 THAP10Q9P2Z0 257 aaPredicted RBP12.47□□□□□ -0.41
COL6A2-204ENST00000409416 FAM172BPA6NC97 362 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms