RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 E9PI62 339 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 NUDT21O43809 227 aaKnown RBP5.75□□□□□ -1.49
SCN1A-203ENST00000409050 TMEM225BP0DP42 221 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 CD8BP10966 210 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 POLR2CP19387 275 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-203ENST00000409050 DRD1P21728 446 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 CRHBPP24387 322 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 ADH7P40394 386 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF133P52736 654 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-203ENST00000409050 SCGB2A2Q13296 93 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 ATXN7L3Q14CW9 347 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-203ENST00000409050 KRBOX4Q5JUW0 171 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 YOD1Q5VVQ6 348 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-203ENST00000409050 BRICD5Q6PL45 260 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 VTCN1Q7Z7D3 282 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 NRMQ8IXM6 262 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 OR6F1Q8NGZ6 308 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 CD200R1Q8TD46 325 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 ZDHHC1Q8WTX9 485 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 TAAR8Q969N4 342 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 JAM3Q9BX67 310 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 C14orf119Q9NWQ9 140 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 B3GNT2Q9NY97 397 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 WRAP73Q9P2S5 460 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-203ENST00000409050 EBF1Q9UH73 591 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 CXorf51AA0A1B0GTR3 108 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 A8MVJ9 347 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 SLC16A6O15403 523 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 STC2O76061 302 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 DIRAS1O95057 198 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 PMS2P2O95744 297 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 CTXN2P0C2S0 81 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 ARSBP15848 533 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 TBPP20226 339 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 OPRD1P41143 372 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 GALEQ14376 348 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 TEAD2Q15562 447 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.74□□□□□ -1.49
SCN1A-203ENST00000409050 CD276Q5ZPR3 534 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 TIGD3Q6B0B8 471 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 FRMPD2BQ6IN97 320 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 GDF6Q6KF10 455 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-203ENST00000409050 OPN5Q6U736 354 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 PTRH1Q86Y79 214 aaKnown RBP5.74□□□□□ -1.49
SCN1A-203ENST00000409050 OR4N5Q8IXE1 308 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF595Q8IYB9 648 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 KDM8Q8N371 416 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 KCT2Q8NC54 265 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 OR51A7Q8NH64 312 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 KCNG3Q8TAE7 436 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 MR1Q95460 341 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 SLC25A44Q96H78 314 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-203ENST00000409050 MCOLN1Q9GZU1 580 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 METTL9Q9H1A3 318 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 C12orf10Q9HB07 376 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 NGBQ9NPG2 151 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 GPR83Q9NYM4 423 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 DIMT1Q9UNQ2 313 aaKnown RBP5.74□□□□□ -1.49
SCN1A-203ENST00000409050 GPR45Q9Y5Y3 372 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 ANTXRLA6NF34 631 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 A8MUA0 341 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 FOXO6A8MYZ6 492 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 CHRM2P08172 466 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 AKR1C4P17516 323 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 GCH1P30793 250 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 IDUAP35475 653 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 NAA10P41227 235 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-203ENST00000409050 OR1E2P47887 323 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 AGTR2P50052 363 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 DUSP6Q16828 381 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF674Q2M3X9 581 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 ACSM3Q53FZ2 586 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 ARSJQ5FYB0 599 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-203ENST00000409050 NDUFAF5Q5TEU4 345 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 PLBD1Q6P4A8 553 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 SBSNQ6UWP8 590 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 PET117Q6UWS5 81 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 NDUFAF7Q7L592 441 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 MRPL21Q7Z2W9 205 aaKnown RBP5.74□□□□□ -1.49
SCN1A-203ENST00000409050 OR7G3Q8NG95 312 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 ZFPM2Q8WW38 1151 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 CORO2AQ92828 525 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 ARMC5Q96C12 935 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 MICU1Q9BPX6 476 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 DUSP23Q9BVJ7 150 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 IKZF4Q9H2S9 585 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 NOX3Q9HBY0 568 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 ACSS2Q9NR19 701 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 RNF19AQ9NV58 838 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 GDE1Q9NZC3 331 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 CD300AQ9UGN4 299 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 A0A0G2JN53 185 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 A0A1W2PPV4 95 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 TK1P04183 234 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 HNRNPA2B1P22626 353 aaKnown RBP5.74□□□□□ -1.49
SCN1A-203ENST00000409050 ACVR1BP36896 505 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 OPRL1P41146 370 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 ERVPABLB-1P60509 514 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 SH3BP2P78314 561 aa5.74□□□□□ -1.49
SCN1A-203ENST00000409050 MC2RQ01718 297 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms