RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 KLHL26Q53HC5 615 aa17.31■□□□□ 0.36
SMARCB1-204ENST00000407422 WDR75Q8IWA0 830 aaKnown RBP17.31■□□□□ 0.36
SMARCB1-204ENST00000407422 OR7D2Q96RA2 312 aa17.31■□□□□ 0.36
SMARCB1-204ENST00000407422 FOXC2Q99958 501 aa17.31■□□□□ 0.36
SMARCB1-204ENST00000407422 SERHL2Q9H4I8 314 aa17.31■□□□□ 0.36
SMARCB1-204ENST00000407422 PLEKHF2Q9H8W4 249 aa17.31■□□□□ 0.36
SMARCB1-204ENST00000407422 HHATLQ9HCP6 504 aa17.31■□□□□ 0.36
SMARCB1-204ENST00000407422 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.31■□□□□ 0.36
SMARCB1-204ENST00000407422 LINGO3P0C6S8 592 aa17.3■□□□□ 0.36
SMARCB1-204ENST00000407422 RAC1P63000 192 aa17.3■□□□□ 0.36
SMARCB1-204ENST00000407422 NDUFAF6Q330K2 333 aa17.3■□□□□ 0.36
SMARCB1-204ENST00000407422 ZNF610Q8N9Z0 462 aa17.3■□□□□ 0.36
SMARCB1-204ENST00000407422 MOAP1Q96BY2 351 aa17.3■□□□□ 0.36
SMARCB1-204ENST00000407422 NUF2Q9BZD4 464 aa17.3■□□□□ 0.36
SMARCB1-204ENST00000407422 CXXC4Q9H2H0 198 aa17.3■□□□□ 0.36
SMARCB1-204ENST00000407422 STOML1Q9UBI4 398 aa17.3■□□□□ 0.36
SMARCB1-204ENST00000407422 CLEC4AQ9UMR7 237 aa17.3■□□□□ 0.36
SMARCB1-204ENST00000407422 TESMINQ9Y4I5 508 aa17.3■□□□□ 0.36
SMARCB1-204ENST00000407422 NF1P21359 2839 aa17.3■□□□□ 0.36
SMARCB1-204ENST00000407422 A0A0J9YW62 118 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 NPIPB9F8W1W9 429 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 TNFSF11O14788 317 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 ADAMDEC1O15204 470 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 CXCL13O43927 109 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 KRT16P08779 473 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 DNASE1P24855 282 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 CD79BP40259 229 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 PAMR1Q6UXH9 720 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 FAM214BQ7L5A3 538 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 C6orf120Q7Z4R8 191 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 ZNF527Q8NB42 609 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 WFIKKN1Q96NZ8 548 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 PAIP2Q9BPZ3 127 aaKnown RBP17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 PRRG4Q9BZD6 226 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 HOXD1Q9GZZ0 328 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 PNPOQ9NVS9 261 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 KLHL28Q9NXS3 571 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 NDRG3Q9UGV2 375 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 HAO1Q9UJM8 370 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 ICAM5Q9UMF0 924 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 CARD8Q9Y2G2 431 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 FLNAP21333 2647 aaKnown RBP17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 EFNA2O43921 213 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 FCGR2AP12318 317 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 SHC1P29353 583 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 CCKARP32238 428 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 ATP12AP54707 1039 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 CASP9P55211 416 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 PHC1P78364 1004 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 FOXF1Q12946 379 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 STX3Q13277 289 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 TOMM34Q15785 309 aaPredicted RBP17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 OLIG3Q7RTU3 272 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 MTERF4Q7Z6M4 381 aaKnown RBP17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 ANKRD46Q86W74 232 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 ZNF614Q8N883 585 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 OR8J2Q8NGG1 315 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 OR2V1Q8NHB1 315 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 ZNF524Q96C55 264 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 SDF2Q99470 211 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 DPY30Q9C005 99 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 ACTL7BQ9Y614 415 aa17.29■□□□□ 0.36
SMARCB1-204ENST00000407422 PRR14LQ5THK1 2151 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 RNF103-CHMP3A0A140T963 221 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 RNASET2O00584 256 aaKnown RBP17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 ANKRD28O15084 1053 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 SCN2BO60939 215 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 CD8BP10966 210 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 POU2F1P14859 743 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 MATN1P21941 496 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 ME2P23368 584 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 UGT2B10P36537 528 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 KCNJ5P48544 419 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 BST1Q10588 318 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 BHLHB9Q6PI77 547 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 ESPNLQ6ZVH7 1005 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 LILRA2Q8N149 483 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 ANKRD42Q8N9B4 389 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 OR4A15Q8NGL6 344 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 PROCRQ9UNN8 238 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 DTNAQ9Y4J8 743 aa17.28■□□□□ 0.36
SMARCB1-204ENST00000407422 ESPNB1AK53 854 aa17.27■□□□□ 0.36
SMARCB1-204ENST00000407422 CASKO14936 926 aa17.27■□□□□ 0.36
SMARCB1-204ENST00000407422 SIAH2O43255 324 aa17.27■□□□□ 0.36
SMARCB1-204ENST00000407422 SOX30O94993 753 aa17.27■□□□□ 0.36
SMARCB1-204ENST00000407422 SNUPNO95149 360 aaKnown RBP17.27■□□□□ 0.36
SMARCB1-204ENST00000407422 ATE1O95260 518 aa17.27■□□□□ 0.36
SMARCB1-204ENST00000407422 NUDT14O95848 222 aa17.27■□□□□ 0.36
SMARCB1-204ENST00000407422 SFTPDP35247 375 aa17.27■□□□□ 0.36
SMARCB1-204ENST00000407422 PCYT1AP49585 367 aa17.27■□□□□ 0.36
SMARCB1-204ENST00000407422 P2RX1P51575 399 aa17.27■□□□□ 0.36
SMARCB1-204ENST00000407422 HBMQ6B0K9 141 aa17.27■□□□□ 0.36
SMARCB1-204ENST00000407422 SLC39A3Q9BRY0 314 aa17.27■□□□□ 0.36
SMARCB1-204ENST00000407422 ELOVL5Q9NYP7 299 aa17.27■□□□□ 0.36
SMARCB1-204ENST00000407422 C6orf203Q9P0P8 240 aaPredicted RBP17.27■□□□□ 0.36
SMARCB1-204ENST00000407422 KCNE5Q9UJ90 142 aa17.27■□□□□ 0.36
SMARCB1-204ENST00000407422 MCTS1Q9ULC4 181 aaKnown RBP17.27■□□□□ 0.36
SMARCB1-204ENST00000407422 EDARQ9UNE0 448 aa17.27■□□□□ 0.36
SMARCB1-204ENST00000407422 FREM1Q5H8C1 2179 aa17.27■□□□□ 0.35
SMARCB1-204ENST00000407422 ROS1P08922 2347 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms