RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 SNNO75324 88 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 TMIGD3P0DMS9 266 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 DDX5P17844 614 aaKnown RBP5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 LBPP18428 481 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 TBXA2RP21731 343 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 CHMP24386 653 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 CTSSP25774 331 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 EPHA3P29320 983 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 IL12AP29459 219 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 SSTR2P30874 369 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 TIMP3P35625 211 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 CLK3P49761 638 aaKnown RBP5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 ASCL1P50553 236 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 C21orf58P58505 322 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 UFM1P61960 85 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 RAC1P63000 192 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 C17orf67Q0P5P2 114 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 SF3B4Q15427 424 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 SMU1Q2TAY7 513 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 SPANXN4Q5MJ08 99 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 DCST2Q5T1A1 773 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 PPP4R4Q6NUP7 873 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 MAVSQ7Z434 540 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 C6orf120Q7Z4R8 191 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 CAMKMTQ7Z624 323 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 HMGN2P46Q86SG4 172 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 ADGRE4PQ86SQ3 457 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 GRAMD2AQ8IUY3 354 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 WDR75Q8IWA0 830 aaKnown RBP5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 HOMEZQ8IX15 550 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZZZ3Q8IYH5 903 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF614Q8N883 585 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 OR4A15Q8NGL6 344 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 PSMA8Q8TAA3 256 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 SFXN5Q8TD22 340 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 ADAMTS15Q8TE58 950 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 FIG4Q92562 907 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 NRGNQ92686 78 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF845Q96IR2 970 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 SLC35G5Q96KT7 338 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 OR7D2Q96RA2 312 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 STACQ99469 402 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 PRPF18Q99633 342 aaKnown RBP5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 SH3GL2Q99962 352 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF559Q9BR84 538 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 PINK1Q9BXM7 581 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 KRTAP4-8Q9BYQ9 185 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 PIGUQ9H490 435 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 TMEM185BQ9H7F4 350 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 PTGES2Q9H7Z7 377 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 MANSC1Q9H8J5 431 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 CALHM2Q9HA72 323 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 MEAF6Q9HAF1 191 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 UBQLN4Q9NRR5 601 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 DUSP22Q9NRW4 184 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 NKIRAS1Q9NYS0 192 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 CRIM1Q9NZV1 1036 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 CLCF1Q9UBD9 225 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 ITGB1BP2Q9UKP3 347 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 FAF1Q9UNN5 650 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 MRPS18CQ9Y3D5 142 aaKnown RBP5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 ACANP16112 2415 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 PRR14LQ5THK1 2151 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 A0A1W2PNV4 684 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 SLC22A20A6NK97 555 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 SYT5O00445 386 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 SCDO00767 359 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 EIF1AYO14602 144 aaKnown RBP5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 HDAC3O15379 428 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 HCRTR2O43614 444 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 TNFRSF21O75509 655 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 SNUPNO95149 360 aaKnown RBP5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 NGFRP08138 427 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 H2AFB1P0C5Y9 115 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 H2AFB2P0C5Z0 115 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 OR12D1P0DN82 309 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 PEPDP12955 493 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 HPGDP15428 266 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 IL11P20809 199 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 ATP6V1C1P21283 382 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 MATN1P21941 496 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 SHC1P29353 583 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 S100A3P33764 101 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 OPRM1P35372 400 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 KIR2DL3P43628 341 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 IDH3AP50213 366 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 SIRPAP78324 504 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 OCRLQ01968 901 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF117Q03924 483 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 GANABQ14697 944 aaKnown RBP5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 TOMM34Q15785 309 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 TMEM44Q2T9K0 475 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 PLPPR5Q32ZL2 321 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 FAM174BQ3ZCQ3 159 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 FLYWCH1Q4VC44 716 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 SLC9B1Q4ZJI4 515 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 TTMPQ5BVD1 217 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 AGBL2Q5U5Z8 902 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms