RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 FGF20Q9NP95 211 aaPredicted RBP15.94■□□□□ 0.14
PTPRA-205ENST00000399903 MRTO4Q9UKD2 239 aaKnown RBP15.94■□□□□ 0.14
PTPRA-205ENST00000399903 TRBV5-4A0A0C4DH59 114 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 DAPL1A0PJW8 107 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 MAGEB4O15481 346 aaPredicted RBP15.94■□□□□ 0.14
PTPRA-205ENST00000399903 FMO6PO60774 539 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 UBXN7O94888 489 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 RHOP08100 348 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 UQCRC2P22695 453 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 PTBP1P26599 531 aaKnown RBP eCLIP15.94■□□□□ 0.145e-7■■■■□ 19.7
PTPRA-205ENST00000399903 GDNFP39905 211 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 RGS7BPQ6MZT1 257 aaPredicted RBP15.94■□□□□ 0.14
PTPRA-205ENST00000399903 LILRA6Q6PI73 481 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 CD200R1LQ6Q8B3 271 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 TFAP2EQ6VUC0 442 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 ZNF783Q6ZMS7 281 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 SLITRK4Q8IW52 837 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 SIRT6Q8N6T7 355 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 CLRN3Q8NCR9 226 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 OR52B4Q8NGK2 314 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 DPYSL5Q9BPU6 564 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 TAAR2Q9P1P5 351 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 LIPT1Q9Y234 373 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 NTNG1Q9Y2I2 539 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 SPTBP11277 2137 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 E9PI62 339 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 NDUFA2O43678 99 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 CATP04040 527 aaKnown RBP15.94■□□□□ 0.14
PTPRA-205ENST00000399903 SLC7A9P82251 487 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 EOGTQ5NDL2 527 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 PIP5KL1Q5T9C9 394 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 FCRLBQ6BAA4 426 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 ZNF322Q6U7Q0 402 aaPredicted RBP15.94■□□□□ 0.14
PTPRA-205ENST00000399903 BTN2A1Q7KYR7 527 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 SFTPA1Q8IWL2 248 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 BADQ92934 168 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 RFKQ969G6 155 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 C11orf49Q9H6J7 331 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 AK6Q9Y3D8 172 aaKnown RBP15.94■□□□□ 0.14
PTPRA-205ENST00000399903 GON4LQ3T8J9 2241 aa15.94■□□□□ 0.14
PTPRA-205ENST00000399903 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.93■□□□□ 0.14
PTPRA-205ENST00000399903 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.93■□□□□ 0.14
PTPRA-205ENST00000399903 GLOD5A6NK44 160 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 H0YIV9 168 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 LEFTY1O75610 366 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 NPR2P20594 1047 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 PDHA2P29803 388 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 E2F1Q01094 437 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 PDZD9Q8IXQ8 264 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 ZNF707Q96C28 371 aaPredicted RBP15.93■□□□□ 0.14
PTPRA-205ENST00000399903 PDXPQ96GD0 296 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 ALG8Q9BVK2 526 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 EQTNQ9NQ60 294 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 DYRK1BQ9Y463 629 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 AP1M2Q9Y6Q5 423 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 A0A087WUU8 490 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 IRGMA1A4Y4 181 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 TSPAN6O43657 245 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 OR5F1O95221 314 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 RLN1P04808 185 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 RB1P06400 928 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 KCNJ5P48544 419 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 HSD11B1LQ7Z5J1 315 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 FGD2Q7Z6J4 655 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 ZNF433Q8N7K0 673 aaPredicted RBP15.93■□□□□ 0.14
PTPRA-205ENST00000399903 C2CD4CQ8TF44 421 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 ATOH1Q92858 354 aaPredicted RBP15.93■□□□□ 0.14
PTPRA-205ENST00000399903 ECHDC3Q96DC8 303 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 LRRC3BQ96PB8 259 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 EVA1AQ9H8M9 152 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 NTMQ9P121 344 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 GRXCR1A8MXD5 290 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 RAB3BP20337 219 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 PPM1AP35813 382 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 VIPR2P41587 438 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 CDK5Q00535 292 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 TPRG1Q6ZUI0 275 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 TMEM99Q8N816 258 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 TAS2R3Q9NYW6 316 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 NDOR1Q9UHB4 597 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 SLC25A13Q9UJS0 675 aa15.93■□□□□ 0.14
PTPRA-205ENST00000399903 F5P12259 2224 aa15.92■□□□□ 0.14
PTPRA-205ENST00000399903 GFYI3L273 518 aa15.92■□□□□ 0.14
PTPRA-205ENST00000399903 LINC00271P0C7V0 271 aa15.92■□□□□ 0.14
PTPRA-205ENST00000399903 IMPA1P29218 277 aa15.92■□□□□ 0.14
PTPRA-205ENST00000399903 VASNQ6EMK4 673 aa15.92■□□□□ 0.14
PTPRA-205ENST00000399903 HIST2H2AA3Q6FI13 130 aa15.92■□□□□ 0.14
PTPRA-205ENST00000399903 CXXC5Q7LFL8 322 aaKnown RBP15.92■□□□□ 0.14
PTPRA-205ENST00000399903 BVESQ8NE79 360 aa15.92■□□□□ 0.14
PTPRA-205ENST00000399903 ZDHHC1Q8WTX9 485 aa15.92■□□□□ 0.14
PTPRA-205ENST00000399903 DMRTA2Q96SC8 542 aa15.92■□□□□ 0.14
PTPRA-205ENST00000399903 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.92■□□□□ 0.143e-6■■□□□ 13.8
PTPRA-205ENST00000399903 ACTR10Q9NZ32 417 aa15.92■□□□□ 0.14
PTPRA-205ENST00000399903 ERVK-19Q9WJR5 959 aa15.92■□□□□ 0.14
PTPRA-205ENST00000399903 STON1Q9Y6Q2 735 aa15.92■□□□□ 0.14
PTPRA-205ENST00000399903 ARID1AO14497 2285 aa15.92■□□□□ 0.14
PTPRA-205ENST00000399903 G3V3Q6 166 aa15.92■□□□□ 0.14
PTPRA-205ENST00000399903 SDC3O75056 442 aa15.92■□□□□ 0.14
PTPRA-205ENST00000399903 MOSPD3O75425 235 aa15.92■□□□□ 0.14
PTPRA-205ENST00000399903 IGF2P01344 180 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms