RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 CHST11Q9NPF2 352 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 MED17Q9NVC6 651 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 SLAMF8Q9P0V8 285 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ICAM5Q9UMF0 924 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 WDR45Q9Y484 360 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 PCDHB14Q9Y5E9 798 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CD8B2A6NJW9 211 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CLCA1A8K7I4 914 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 H3BNH8 94 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 GTPBP1O00178 669 aaKnown RBP12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 NR5A2O00482 541 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 SEC14L5O43304 696 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 H6PDO95479 791 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 NUDT14O95848 222 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 OPN1LWP04000 364 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ZCCHC18P0CG32 403 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 PEPDP12955 493 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CAPN3P20807 821 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CEACAM8P31997 349 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 TIMP3P35625 211 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ZNF41P51814 821 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 AGFG1P52594 562 aaKnown RBP12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CHRNEQ04844 493 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 TFF3Q07654 80 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 TOMM34Q15785 309 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ZNF141Q15928 474 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 PLPPR5Q32ZL2 321 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 GLYR1Q49A26 553 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 AGKQ53H12 422 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 MSANTD1Q6ZTZ1 278 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ANKFN1Q8N957 763 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 C9orf106Q8NAJ2 232 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 SPDL1Q96EA4 605 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 RNF145Q96MT1 663 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 PAIP1Q9H074 479 aaKnown RBP12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CALHM2Q9HA72 323 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 TPT1P8Q9HAU6 139 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 KCNJ16Q9NPI9 418 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 SLC52A3Q9NQ40 469 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 FGFR1OP2Q9NVK5 253 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ARHGAP21Q5T5U3 1957 aa12.72□□□□□ -0.37
HLA-DQB1-202ENST00000399079 DCHS2Q6V1P9 2916 aa12.71□□□□□ -0.37
HLA-DQB1-202ENST00000399079 MBD3L4A6NDZ8 208 aaPredicted RBP12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MBD3L3A6NE82 208 aaPredicted RBP12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SERINC4A6NH21 518 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MBD3L5A6NJ08 208 aaPredicted RBP12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 KIAA0513O60268 411 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 BCAS1O75363 584 aaPredicted RBP12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 KRT75O95678 551 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 IL2RAP01589 272 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CHRM4P08173 479 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 LINGO3P0C6S8 592 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 UBL4AP11441 157 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ETFAP13804 333 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 BMP5P22003 454 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 PSMA4P25789 261 aaKnown RBP12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CRATP43155 626 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 P2RX1P51575 399 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ZNF136P52737 540 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SF3B4Q15427 424 aaKnown RBP eCLIP12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 BCL2A1Q16548 175 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 PAGE3Q5JUK9 113 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 GTPBP8Q8N3Z3 284 aaPredicted RBP12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ARFGAP2Q8N6H7 521 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MBD3L2Q8NHZ7 208 aaPredicted RBP12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 POC1BQ8TC44 478 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SAP130Q9H0E3 1048 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 RUBCNLQ9H714 662 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TMEM185BQ9H7F4 350 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 HHATLQ9HCP6 504 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MED4Q9NPJ6 270 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CLCF1Q9UBD9 225 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 L3MBTL1Q9Y468 752 aa12.71□□□□□ -0.38
HLA-DQB1-202ENST00000399079 PKDREJQ9NTG1 2253 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ITPR2Q14571 2701 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 A0A087WZY1 265 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CLDN24A6NM45 220 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 HSPB2A8KAH6 182 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 FAM47E-STBD1D6RA91 191 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 LINC01387J3KSC0 135 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ZNF264O43296 627 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CYP7B1O75881 506 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TGM6O95932 706 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 UBTFL6P0CB48 400 aaPredicted RBP12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 HOXB9P17482 250 aaPredicted RBP12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 IL11P20809 199 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ATP4BP51164 291 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CCR4P51679 360 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 FOXF2Q12947 444 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SKP2Q13309 424 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SQLEQ14534 574 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MAPK11Q15759 364 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 HSPB2Q16082 182 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 AP1ARQ63HQ0 302 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CGB2Q6NT52 195 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 POMZP3Q6PJE2 187 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 GCNT2Q8N0V5 402 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ZNF619Q8N2I2 560 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MEIOBQ8N635 442 aa12.7□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TMCO5AQ8N6Q1 288 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms