RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 FBXL2Q9UKC9 423 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 SLC22A31A6NKX4 558 aa13.71□□□□□ -0.22
RPRD1A-202ENST00000399022 PPM1BO75688 479 aa13.71□□□□□ -0.22
RPRD1A-202ENST00000399022 TYRP1P17643 537 aa13.71□□□□□ -0.22
RPRD1A-202ENST00000399022 PSMB1P20618 241 aaKnown RBP13.71□□□□□ -0.22
RPRD1A-202ENST00000399022 GNALP38405 381 aa13.71□□□□□ -0.22
RPRD1A-202ENST00000399022 SLC1A3P43003 542 aa13.71□□□□□ -0.22
RPRD1A-202ENST00000399022 CLDN20P56880 219 aa13.71□□□□□ -0.22
RPRD1A-202ENST00000399022 ILKQ13418 452 aa13.71□□□□□ -0.22
RPRD1A-202ENST00000399022 APOOLQ6UXV4 268 aa13.71□□□□□ -0.22
RPRD1A-202ENST00000399022 OR4N5Q8IXE1 308 aa13.71□□□□□ -0.22
RPRD1A-202ENST00000399022 OR5D16Q8NGK9 328 aa13.71□□□□□ -0.22
RPRD1A-202ENST00000399022 BBS10Q8TAM1 723 aa13.71□□□□□ -0.22
RPRD1A-202ENST00000399022 PITX2Q99697 317 aa13.71□□□□□ -0.22
RPRD1A-202ENST00000399022 GABARAPL3Q9BY60 117 aa13.71□□□□□ -0.22
RPRD1A-202ENST00000399022 DIMT1Q9UNQ2 313 aaKnown RBP13.71□□□□□ -0.22
RPRD1A-202ENST00000399022 OR52A4PA6NMU1 304 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 VEGFDO43915 354 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 FOSL2P15408 326 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 IL1RNP18510 177 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 AHRP35869 848 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 S100A10P60903 97 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 DEFB134Q4QY38 66 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 OR6M1Q8NGM8 313 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 ZNF563Q8TA94 476 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 ZNF304Q9HCX3 659 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 IL23AQ9NPF7 189 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 GSKIPQ9P0R6 139 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 HS3ST2Q9Y278 367 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 EEF1E1-BLOC1S5C9J1V9 151 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 SSX5O60225 188 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 SLC6A11P48066 632 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 OCLNQ16625 522 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 TCEAL5Q5H9L2 206 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 TMEM107Q6UX40 140 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 GPR155Q7Z3F1 870 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 C12orf57Q99622 126 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 POTEKPQ9BYX7 375 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 SLC6A13Q9NSD5 602 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 BABAM2Q9NXR7 383 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 FBXL21Q9UKT6 434 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 ATAD5Q96QE3 1844 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 TMEM202A6NGA9 273 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 APOC1P02654 83 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 GUCA1AP43080 201 aaPredicted RBP13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 PCGF3Q3KNV8 242 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 C3orf38Q5JPI3 329 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 NLRP8Q86W28 1048 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 GPR135Q8IZ08 494 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 SMARCD2Q92925 531 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 GAL3ST3Q96A11 431 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 CXXC1Q9P0U4 656 aaPredicted RBP13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 PRSS44E7EML9 344 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 RBMS1P29558 406 aaKnown RBP13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 GRK5P34947 590 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 ART1P52961 327 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 CDONQ4KMG0 1287 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 C8orf82Q6P1X6 216 aaPredicted RBP13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 FAHD1Q6P587 224 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 KCTD20Q7Z5Y7 419 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 JAGN1Q8N5M9 183 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 OR8J2Q8NGG1 315 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 PFDN5Q99471 154 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 HHATLQ9HCP6 504 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 DMRT3Q9NQL9 472 aa13.7□□□□□ -0.22
RPRD1A-202ENST00000399022 UCHL1P09936 223 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 PSMB5P28074 263 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 S100A11P31949 105 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 GDNFP39905 211 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 AQP2P41181 271 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 CSNK1DP48730 415 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 FAM69AQ5T7M9 428 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 RDH10Q8IZV5 341 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 OR52E4Q8NGH9 312 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 ZNF582Q96NG8 517 aaPredicted RBP13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 GAL3ST4Q96RP7 486 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 AGPAT2O15120 278 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 PRSS23O95084 383 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 TIMP1P01033 207 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 ELK1P19419 428 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 SORDQ00796 357 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 HBMQ6B0K9 141 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 LRRC46Q96FV0 321 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 ZNF354BQ96LW1 612 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 SEC22CQ9BRL7 303 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 TMEM121BQ9BXQ6 578 aaPredicted RBP13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 DNMT3BQ9UBC3 853 aaKnown RBP13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 ZFC3H1O60293 1989 aaKnown RBP13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 ERVH48-1M5A8F1 160 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 XKRYO14609 159 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 DBIP07108 87 aaKnown RBP13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 HNRNPA1P09651 372 aaKnown RBP eCLIP13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 PPP3CBP16298 524 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 IMPA1P29218 277 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 ETV5P41161 510 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 KCNJ10P78508 379 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 TP53I3Q53FA7 332 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 ZNF546Q86UE3 836 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 SVBPQ8N300 66 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 MRPL43Q8N983 215 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms