RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 PHOSPHO1Q8TCT1 267 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 ZBTB9Q96C00 473 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 STARD4Q96DR4 205 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 OR7D2Q96RA2 312 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 DPY30Q9C005 99 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 RNF122Q9H9V4 155 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 NDRG3Q9UGV2 375 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 ST6GALNAC2Q9UJ37 374 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 HAO1Q9UJM8 370 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 CSPG4Q6UVK1 2322 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 NUP214P35658 2090 aaPredicted RBP12.06□□□□□ -0.48
VCX3A-202ENST00000398729 ZANQ9Y493 2812 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 SH3D21A4FU49 640 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 DUXAA6NLW8 204 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 RNASET2O00584 256 aaKnown RBP12.05□□□□□ -0.48
VCX3A-202ENST00000398729 EIF1AYO14602 144 aaKnown RBP12.05□□□□□ -0.48
VCX3A-202ENST00000398729 FOSL1P15407 271 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 LBPP18428 481 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 ME2P23368 584 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 KIR2DL2P43627 348 aaPredicted RBP12.05□□□□□ -0.48
VCX3A-202ENST00000398729 ATP12AP54707 1039 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 RAC1P63000 192 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 PPP2R2AP63151 447 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 SIRPAP78324 504 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 ADAM8P78325 824 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 KLHL26Q53HC5 615 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 HHATQ5VTY9 493 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 PPP4R4Q6NUP7 873 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 VWA1Q6PCB0 445 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 BTLAQ7Z6A9 289 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 CDC20BQ86Y33 519 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 LRRC34Q8IZ02 419 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 CLECL1Q8IZS7 167 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 ANKRD42Q8N9B4 389 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 VPS37AQ8NEZ2 397 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 OR8J2Q8NGG1 315 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 RNF145Q96MT1 663 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 DACH2Q96NX9 599 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 NUF2Q9BZD4 464 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 PRRG4Q9BZD6 226 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 PAQR5Q9NXK6 330 aaPredicted RBP12.05□□□□□ -0.48
VCX3A-202ENST00000398729 KCNE3Q9Y6H6 103 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 ATRQ13535 2644 aa12.05□□□□□ -0.48
VCX3A-202ENST00000398729 STAB1Q9NY15 2570 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 NPIPA5A0A0B4J1W7 369 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 RNF103-CHMP3A0A140T963 221 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 NPIPA7E9PJI5 369 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 GTPBP1O00178 669 aaKnown RBP12.04□□□□□ -0.48
VCX3A-202ENST00000398729 CASKO14936 926 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 AQP8O94778 261 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 NUDT14O95848 222 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 AK1P00568 194 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 NPIPA8P0DM63 369 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 MATN1P21941 496 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 PSMA4P25789 261 aaKnown RBP12.04□□□□□ -0.48
VCX3A-202ENST00000398729 EIF1P41567 113 aaKnown RBP12.04□□□□□ -0.48
VCX3A-202ENST00000398729 PCYT1AP49585 367 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 P2RX1P51575 399 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 SUMO3P55854 103 aaPredicted RBP12.04□□□□□ -0.48
VCX3A-202ENST00000398729 RPS26P62854 115 aaKnown RBP12.04□□□□□ -0.48
VCX3A-202ENST00000398729 ZNF117Q03924 483 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 BST1Q10588 318 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 PDSS1Q5T2R2 415 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 ESPNLQ6ZVH7 1005 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 C6orf120Q7Z4R8 191 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 ZNF614Q8N883 585 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 OR5D16Q8NGK9 328 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 OR4A15Q8NGL6 344 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 OR10D3Q8NH80 312 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 TESCQ96BS2 214 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 NPAS1Q99742 590 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 SMR3AQ99954 134 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 SLC39A3Q9BRY0 314 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 MEAF6Q9HAF1 191 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 MCTS1Q9ULC4 181 aaKnown RBP12.04□□□□□ -0.48
VCX3A-202ENST00000398729 DTNAQ9Y4J8 743 aa12.04□□□□□ -0.48
VCX3A-202ENST00000398729 UQCRHLA0A096LP55 91 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 PRSS51A0A1B0GVH4 220 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 TMEM120BA0PK00 339 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 NPIPB9F8W1W9 429 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 TNFSF11O14788 317 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 ADAMDEC1O15204 470 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 SYNGR4O95473 234 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 PLGP00747 810 aaPredicted RBP12.03□□□□□ -0.48
VCX3A-202ENST00000398729 LINGO3P0C6S8 592 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 CD8BP10966 210 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 DNASE1P24855 282 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 ADH6P28332 368 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 CD79BP40259 229 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 CLNS1AP54105 237 aaKnown RBP12.03□□□□□ -0.48
VCX3A-202ENST00000398729 LTBQ06643 244 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 FAM27E3Q08E93 113 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 DPY19L1Q2PZI1 675 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.03□□□□□ -0.48
VCX3A-202ENST00000398729 ANXA8L1Q5VT79 327 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 OGFOD2Q6N063 350 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 CBLN3Q6UW01 205 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 FAM214BQ7L5A3 538 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 ADGRG7Q96K78 797 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 SLC35G5Q96KT7 338 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms