RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ZNF619Q8N2I2 560 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 ANKK1Q8NFD2 765 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 CREB3L1Q96BA8 519 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 RANBP3Q9H6Z4 567 aaPredicted RBP13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 SYNPO2LQ9H987 977 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 CUTCQ9NTM9 273 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 NUDT21O43809 227 aaKnown RBP13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 LETMD1Q6P1Q0 360 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 TLDC1Q6P9B6 456 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 TEX19Q8NA77 164 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 MUCL1Q96DR8 90 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 PLEKHA3Q9HB20 300 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 OBP2BQ9NPH6 170 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 SBF2Q86WG5 1849 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 CCDC163A0A0D9SF12 145 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 ANKRD30BLA7E2S9 258 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 H0YAE9 185 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 CNR2P34972 360 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 ART1P52961 327 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 RRADP55042 308 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 SIRPAP78324 504 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 EFR3AQ14156 821 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 SLC35F2Q8IXU6 374 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 VWA5B2Q8N398 1253 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 OR9Q2Q8NGE9 314 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 OR9A4Q8NGU2 314 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 TMEM174Q8WUU8 243 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 UTP23Q9BRU9 249 aaKnown RBP13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 C6orf106Q9H6K1 298 aaPredicted RBP13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 VSX1Q9NZR4 365 aaPredicted RBP13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 STUB1Q9UNE7 303 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 TMEM184BQ9Y519 407 aaPredicted RBP13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 CDK5RAP2Q96SN8 1893 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 TCHHQ07283 1943 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 C1SP09871 688 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 UBL4AP11441 157 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 MOGQ16653 247 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 ISCA2Q86U28 154 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 ZNF808Q8N4W9 903 aaPredicted RBP13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 ZMYND19Q96E35 227 aaPredicted RBP13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 FAM117AQ9C073 453 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 TAS2R3Q9NYW6 316 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 ABRACLQ9P1F3 81 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 B8ZZF3 427 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 HHLA1C9JL84 531 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 PRAMEF20Q5VT98 475 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 FAM160A2Q8N612 972 aaPredicted RBP13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 OR5H2Q8NGV7 314 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 ADOQ96SZ5 270 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 PHOX2BQ99453 314 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 TUBA1CQ9BQE3 449 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 MYNNQ9NPC7 610 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 BOKQ9UMX3 212 aaPredicted RBP13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 A0A1W2PPC1 479 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 FAM230AA0A1W2PPH8 454 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 EIF3FO00303 357 aaPredicted RBP13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 KNG1P01042 644 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 DDCP20711 480 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 ETV5P41161 510 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 MTNR1AP48039 350 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 RGNQ15493 299 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 TP53I3Q53FA7 332 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 CYS1Q717R9 158 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 KDM1BQ8NB78 822 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 OR4K5Q8NGD3 323 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 CDS1Q92903 461 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 EBF1Q9UH73 591 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 TNS1Q9HBL0 1735 aaKnown RBP13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 PHYHO14832 338 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 PRLP01236 227 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 SDR9C7Q8NEX9 313 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 OR13H1Q8NG92 308 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 MAFIPQ8WZ33 124 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 NEIL2Q969S2 332 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 RRNAD1Q96FB5 475 aaKnown RBP13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 SMIM14Q96QK8 99 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 NUDT22Q9BRQ3 303 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 ST6GALNAC5Q9BVH7 336 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 TM7SF3Q9NS93 570 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 IL17CQ9P0M4 197 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 COL4A5P29400 1685 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 GGT1P19440 569 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 FOXA1P55317 472 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 PIN1Q13526 163 aaPredicted RBP13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 NKPD1Q17RQ9 610 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 PTERQ96BW5 349 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 SHOXO15266 292 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 CHRNB4P30926 498 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 CSNK2A1P68400 391 aaPredicted RBP13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 HOXC5Q00444 222 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 SLC16A9Q7RTY1 509 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 IFI44Q8TCB0 444 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 IER2Q9BTL4 223 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 ANKRD10Q9NXR5 420 aa13.37□□□□□ -0.27
PCDHA11-201ENST00000398640 PTH2RP49190 550 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 ZNF616Q08AN1 781 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 CSNK2A3Q8NEV1 391 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 TOMM40LQ969M1 308 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 KLKB1P03952 638 aa13.36□□□□□ -0.27
PCDHA11-201ENST00000398640 AMY2AP04746 511 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms