RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 ZG16BQ96DA0 208 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 NSL1Q96IY1 281 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 GNRHR2Q96P88 292 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 ECSITQ9BQ95 431 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 ZNF703Q9H7S9 590 aaPredicted RBP23.13■■□□□ 1.29
U2AF1-203ENST00000398137 CMTM6Q9NX76 183 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 C15orf41Q9Y2V0 281 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 DTNAQ9Y4J8 743 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 CACNA1CQ13936 2221 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 DSPPQ9NZW4 1301 aa23.12■■□□□ 1.29
U2AF1-203ENST00000398137 A0A1W2PQD3 144 aa23.12■■□□□ 1.29
U2AF1-203ENST00000398137 ABOP16442 354 aa23.12■■□□□ 1.29
U2AF1-203ENST00000398137 ELAVL4P26378 380 aaKnown RBP23.12■■□□□ 1.29
U2AF1-203ENST00000398137 GZMMP51124 257 aa23.12■■□□□ 1.29
U2AF1-203ENST00000398137 SLC7A2P52569 658 aa23.12■■□□□ 1.29
U2AF1-203ENST00000398137 PSME3P61289 254 aa23.12■■□□□ 1.29
U2AF1-203ENST00000398137 MXRA7P84157 204 aa23.12■■□□□ 1.29
U2AF1-203ENST00000398137 SERPINA11Q86U17 422 aa23.12■■□□□ 1.29
U2AF1-203ENST00000398137 C11orf65Q8NCR3 313 aa23.12■■□□□ 1.29
U2AF1-203ENST00000398137 DUSP19Q8WTR2 217 aa23.12■■□□□ 1.29
U2AF1-203ENST00000398137 HOPXQ9BPY8 73 aaPredicted RBP23.12■■□□□ 1.29
U2AF1-203ENST00000398137 SDHAF3Q9NRP4 125 aa23.12■■□□□ 1.29
U2AF1-203ENST00000398137 B4GALT7Q9UBV7 327 aa23.12■■□□□ 1.29
U2AF1-203ENST00000398137 L3MBTL1Q9Y468 752 aa23.12■■□□□ 1.29
U2AF1-203ENST00000398137 LRBAP50851 2863 aa23.12■■□□□ 1.29
U2AF1-203ENST00000398137 CCT8L1PA6NM43 557 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 B4DXG7 233 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 GMFGO60234 142 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 GDF1P27539 372 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 HTR1EP28566 365 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 MAGEA5P43359 124 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 HYAL4Q2M3T9 481 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 NDUFAF6Q330K2 333 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 REEP3Q6NUK4 255 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 XKRXQ6PP77 449 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 CALHM3Q86XJ0 350 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 PLCZ1Q86YW0 608 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 SLC15A3Q8IY34 581 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 OR4K17Q8NGC6 315 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 BBS10Q8TAM1 723 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 PHOSPHO1Q8TCT1 267 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 MTHFD2LQ9H903 347 aaPredicted RBP23.11■■□□□ 1.29
U2AF1-203ENST00000398137 FBXL2Q9UKC9 423 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 USP22Q9UPT9 525 aa23.11■■□□□ 1.29
U2AF1-203ENST00000398137 A0A0G2JPF8 293 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 SERINC4A6NH21 518 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 AGAP5A6NIR3 686 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 HNRNPCL2B2RXH8 293 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 HNRNPCL3B7ZW38 293 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 H3BNH8 94 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 C19orf84I3L1E1 186 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 OIP5O43482 229 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 HNRNPCL1O60812 293 aaKnown RBP23.1■■□□□ 1.29
U2AF1-203ENST00000398137 UBOX5O94941 541 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 PGM3O95394 542 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 CELA3AP09093 270 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 HNRNPCL4P0DMR1 293 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 AGAP20933 346 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 RBBP4Q09028 425 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 PRAMEF8Q5VWM4 474 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 PRAMEF7Q5VXH5 474 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 AP1ARQ63HQ0 302 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 PEX5LQ8IYB4 626 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 FAM109AQ8N4B1 249 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 METTL25Q8N6Q8 603 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 FAM57AQ8TBR7 257 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 SH3YL1Q96HL8 342 aaPredicted RBP23.1■■□□□ 1.29
U2AF1-203ENST00000398137 SPATA9Q9BWV2 254 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 DSN1Q9H410 356 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 BCL2L10Q9HD36 194 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 MED11Q9P086 117 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 GMPR2Q9P2T1 348 aaKnown RBP23.1■■□□□ 1.29
U2AF1-203ENST00000398137 ANGPT4Q9Y264 503 aa23.1■■□□□ 1.29
U2AF1-203ENST00000398137 DNAJC13O75165 2243 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 NME4O00746 187 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 CDC40O60508 579 aaKnown RBP eCLIP23.09■■□□□ 1.29
U2AF1-203ENST00000398137 RPS4Y1P22090 263 aaKnown RBP23.09■■□□□ 1.29
U2AF1-203ENST00000398137 CALB2P22676 271 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 AQP1P29972 269 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 PCGF2P35227 344 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 PTGS2P35354 604 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 MNAT1P51948 309 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 SLC25A3Q00325 362 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 C17orf67Q0P5P2 114 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 TOMM20Q15388 145 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 MISPQ8IVT2 679 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 MARVELD2Q8N4S9 558 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 HIPK4Q8NE63 616 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 OR2M3Q8NG83 312 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 PHF10Q8WUB8 498 aaKnown RBP23.09■■□□□ 1.29
U2AF1-203ENST00000398137 WDR60Q8WVS4 1066 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 ZNF583Q96ND8 569 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 DEFB127Q9H1M4 99 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 UBQLN3Q9H347 655 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 ZDHHC11Q9H8X9 412 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 APCP25054 2843 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 NCKAP5O14513 1909 aa23.09■■□□□ 1.29
U2AF1-203ENST00000398137 CSMD2Q7Z408 3487 aa23.08■■□□□ 1.29
U2AF1-203ENST00000398137 CLDN24A6NM45 220 aa23.08■■□□□ 1.29
U2AF1-203ENST00000398137 FAM220BPB1ANY3 271 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms