RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 ZNF485Q8NCK3 441 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 ZDHHC1Q8WTX9 485 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 DOLKQ9UPQ8 538 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 A0A087WZY1 265 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 SLC9B1P1A6NJY1 282 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 RIIAD1A6NNX1 92 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 FFAR1O14842 300 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF208O43345 1280 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 DNAJB6O75190 326 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 NPIPB7O75200 414 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 MAPK3P27361 379 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-206ENST00000397617 CCR9P51686 369 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 PLK5Q496M5 336 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 TYW3Q6IPR3 259 aaKnown RBP5.44□□□□□ -1.54
PTPRD-206ENST00000397617 LAT2Q9GZY6 243 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 TPK1Q9H3S4 243 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 LMAN1LQ9HAT1 526 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 FOLH1BQ9HBA9 442 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 TRIM36Q9NQ86 728 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 SDHAF3Q9NRP4 125 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 NTNG1Q9Y2I2 539 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 COL6A6A6NMZ7 2263 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 HRGP04196 525 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 SERPIND1P05546 499 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 CD14P08571 375 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 ICAM2P13598 275 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 SSBP1Q04837 148 aaKnown RBP5.44□□□□□ -1.54
PTPRD-206ENST00000397617 TSTA3Q13630 321 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-206ENST00000397617 GGTLC2Q14390 218 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 TMEM71Q6P5X7 295 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 DPY19L2P2Q6ZN68 376 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 SLC16A12Q6ZSM3 486 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 GPR151Q8TDV0 419 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 PHF21AQ96BD5 680 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 SENP5Q96HI0 755 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-206ENST00000397617 SLIRPQ9GZT3 109 aaKnown RBP5.44□□□□□ -1.54
PTPRD-206ENST00000397617 TSR3Q9UJK0 312 aaKnown RBP5.44□□□□□ -1.54
PTPRD-206ENST00000397617 COQ6Q9Y2Z9 468 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 A0A087WUJ7 227 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 MYL12BO14950 172 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 IL33O95760 270 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 NR4A2P43354 598 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 HSPB3Q12988 150 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 TBPL2Q6SJ96 375 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 PLEKHM3Q6ZWE6 761 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF248Q8NDW4 579 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 PRTFDC1Q9NRG1 225 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 CENPFP49454 3210 aa5.44□□□□□ -1.54
PTPRD-206ENST00000397617 MEGF11A6BM72 1044 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 MT-ND1P03886 318 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 MC3RP41968 323 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 RPS4XP62701 263 aaKnown RBP5.43□□□□□ -1.54
PTPRD-206ENST00000397617 ARL6IP1Q15041 203 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 TIGD6Q17RP2 521 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 DNM1P34Q6PK57 102 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 SLC34A3Q8N130 599 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 OR6Q1Q8NGQ2 317 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 LCORQ96JN0 433 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-206ENST00000397617 RPP25Q9BUL9 199 aaKnown RBP5.43□□□□□ -1.54
PTPRD-206ENST00000397617 FKBP7Q9Y680 259 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 LOC102723996A0A087X1L8 192 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 FGF5P12034 268 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 TYRP1P17643 537 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 MMP11P24347 488 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 SOX9P48436 509 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 TAS2R41P59536 307 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 PMS2P3Q13401 168 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 RGS21Q2M5E4 152 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF730Q6ZMV8 503 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 TBC1D15Q8TC07 691 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 TMEM239Q8WW34 195 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 AHCYL2Q96HN2 611 aaKnown RBP5.43□□□□□ -1.54
PTPRD-206ENST00000397617 LPAR4Q99677 370 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 NRIP3Q9NQ35 241 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 GRIP1Q9Y3R0 1128 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 PRAMEF25A6NGN4 478 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 FOXS1O43638 330 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 OR10H2O60403 315 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 PSG6Q00889 435 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 CHRNEQ04844 493 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 ZP2Q05996 745 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 GINS1Q14691 196 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 OXA1LQ15070 435 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF362Q5T0B9 420 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-206ENST00000397617 TPRG1LQ5T0D9 272 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 PMS2CLQ68D20 193 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF441Q8N8Z8 693 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 NDC1Q9BTX1 674 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 MARCH7Q9H992 704 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 COPS7AQ9UBW8 275 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 SIGLEC7Q9Y286 467 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 ATRXP46100 2492 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 H3BN98 237 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 TPD52L2O43399 206 aaKnown RBP5.43□□□□□ -1.54
PTPRD-206ENST00000397617 TPST2O60704 377 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 CER1O95813 267 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 CBX7O95931 251 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 ST6GAL1P15907 406 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF182P17025 639 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-206ENST00000397617 S1PR1P21453 382 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms