RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 PCDH8O95206 1070 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 C1QBP02746 253 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 CCL23P55773 120 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 FXYD6P3P58550 94 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 RPS26P62854 115 aaKnown RBP5.11□□□□□ -1.59
PTPRD-205ENST00000397611 MRPS10P82664 201 aaKnown RBP5.11□□□□□ -1.59
PTPRD-205ENST00000397611 PUM1Q14671 1186 aaKnown RBP eCLIP5.11□□□□□ -1.59
PTPRD-205ENST00000397611 TRAM2Q15035 370 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 DUSP7Q16829 419 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 ISXQ2M1V0 245 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 SAXO2Q658L1 398 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 LYPD4Q6UWN0 246 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 ZNF454Q8N9F8 522 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 OR4M2Q8NGB6 313 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 OR5T2Q8NGG2 359 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 TGIF2Q9GZN2 237 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 POLR2AP24928 1970 aaKnown RBP5.11□□□□□ -1.59
PTPRD-205ENST00000397611 GPRIN2O60269 458 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 SC5DO75845 299 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 SIX6O95475 246 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 TGM6O95932 706 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 ACP2P11117 423 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 GPR1P46091 355 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 SOX2P48431 317 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 RNF144AP50876 292 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-205ENST00000397611 RPS25P62851 125 aaKnown RBP5.11□□□□□ -1.59
PTPRD-205ENST00000397611 ILF3Q12906 894 aaKnown RBP eCLIP5.11□□□□□ -1.59
PTPRD-205ENST00000397611 IGSF11Q5DX21 431 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 HES5Q5TA89 166 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 ANKRD34AQ69YU3 496 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 LIPIQ6XZB0 460 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 GLCCI1Q86VQ1 547 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 SYT14Q8NB59 555 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 C16orf78Q8WTQ4 265 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 IRF7Q92985 503 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 C12orf57Q99622 126 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 IL20Q9NYY1 176 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 C2orf78A6NCI8 922 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 GATBO75879 557 aaKnown RBP5.11□□□□□ -1.59
PTPRD-205ENST00000397611 MAP4K2Q12851 820 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 HYAL4Q2M3T9 481 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 ZNF674Q2M3X9 581 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 AVPI1Q5T686 147 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 LRRC69Q6ZNQ3 347 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 TRILQ7L0X0 811 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 ESX1Q8N693 406 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 ZNF485Q8NCK3 441 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 GNPDA2Q8TDQ7 276 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 DTD2Q96FN9 168 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 ST6GAL2Q96JF0 529 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 TRMT61BQ9BVS5 477 aaKnown RBP5.11□□□□□ -1.59
PTPRD-205ENST00000397611 SYT4Q9H2B2 425 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 IFT22Q9H7X7 185 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 ZCCHC3Q9NUD5 404 aaKnown RBP5.11□□□□□ -1.59
PTPRD-205ENST00000397611 CNTRLQ7Z7A1 2325 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 PLXNB2O15031 1838 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 LILRB3O75022 631 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 CTSAP10619 480 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 AHRP35869 848 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 ZNF155Q12901 538 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-205ENST00000397611 GPNMBQ14956 572 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 AANATQ16613 207 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 PRAMEF14Q5SWL7 426 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 C18orf63Q68DL7 685 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 GPER1Q99527 375 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 SDHCQ99643 169 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-205ENST00000397611 NIT2Q9NQR4 276 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 NTMQ9P121 344 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 CA5BQ9Y2D0 317 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 PRAMEF25A6NGN4 478 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 K7ERQ8 282 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 UBXN7O94888 489 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 STATHP02808 62 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 LIMS3P0CW19 117 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 LIMS4P0CW20 117 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 RD3LP0DJH9 198 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 NDUFS1P28331 727 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 CD34P28906 385 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 KIAA1024LP59773 190 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 SORDQ00796 357 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 ST3GAL3Q11203 375 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 CST9Q5W186 159 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 TXNDC8Q6A555 127 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 TMEM19Q96HH6 336 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 SMIM14Q96QK8 99 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 RRAGCQ9HB90 399 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 SDHAF2Q9NX18 166 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 TSPAN6O43657 245 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 SNAPINO95295 136 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 LDOC1O95751 146 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-205ENST00000397611 IGHA1P01876 353 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 SNRNP70P08621 437 aaKnown RBP5.11□□□□□ -1.59
PTPRD-205ENST00000397611 ETFAP13804 333 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 CERS1P27544 350 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 RPS13P62277 151 aaKnown RBP5.11□□□□□ -1.59
PTPRD-205ENST00000397611 TMEM115Q12893 351 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-205ENST00000397611 BEX5Q5H9J7 111 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 PRSS55Q6UWB4 352 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-205ENST00000397611 GSG1LQ6UXU4 331 aa5.11□□□□□ -1.59
PTPRD-205ENST00000397611 C17orf107Q6ZR85 190 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms