RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 POLHQ9Y253 713 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 PCYT1BQ9Y5K3 369 aaPredicted RBP7.67□□□□□ -1.18
PTPRD-204ENST00000397606 TMEM14AQ9Y6G1 99 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 FRMPD3Q5JV73 1810 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 HTR3EA5X5Y0 456 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 NPIPB8E9PQR5 432 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 SERPINA3P01011 423 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 DBTP11182 482 aaKnown RBP7.67□□□□□ -1.18
PTPRD-204ENST00000397606 IDUAP35475 653 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 DNASE1L1P49184 302 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ARMCX4Q5H9R4 360 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 B3GNT6Q6ZMB0 384 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 P2RY8Q86VZ1 359 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ZADH2Q8N4Q0 377 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 OR4C15Q8NGM1 316 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 GOT1L1Q8NHS2 421 aaPredicted RBP7.67□□□□□ -1.18
PTPRD-204ENST00000397606 THEM6Q8WUY1 208 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF764Q96H86 408 aaPredicted RBP7.67□□□□□ -1.18
PTPRD-204ENST00000397606 TMEM80Q96HE8 168 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 LIN28AQ9H9Z2 209 aaKnown RBP7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ELL3Q9HB65 397 aaPredicted RBP7.67□□□□□ -1.18
PTPRD-204ENST00000397606 SLAMF7Q9NQ25 335 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 RPRD1BQ9NQG5 326 aaKnown RBP7.67□□□□□ -1.18
PTPRD-204ENST00000397606 RXFP3Q9NSD7 469 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 CNIH4Q9P003 139 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ABCG2Q9UNQ0 655 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 GREB1Q4ZG55 1949 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF99A8MXY4 864 aaPredicted RBP7.67□□□□□ -1.18
PTPRD-204ENST00000397606 PFDN1O60925 122 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 DDAH2O95865 285 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 POLR2HP52434 150 aaKnown RBP7.67□□□□□ -1.18
PTPRD-204ENST00000397606 KRR1Q13601 381 aaKnown RBP7.67□□□□□ -1.18
PTPRD-204ENST00000397606 PODNL1Q6PEZ8 512 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 KCTD18Q6PI47 426 aaPredicted RBP7.67□□□□□ -1.18
PTPRD-204ENST00000397606 FAM181AQ8N9Y4 354 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.67□□□□□ -1.18
PTPRD-204ENST00000397606 DGCR14Q96DF8 476 aaKnown RBP7.67□□□□□ -1.18
PTPRD-204ENST00000397606 MND1Q9BWT6 205 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 VN1R1Q9GZP7 353 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 BCL2L10Q9HD36 194 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 TRIM36Q9NQ86 728 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 LAMP5Q9UJQ1 280 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 EXOSC1Q9Y3B2 195 aaKnown RBP7.67□□□□□ -1.18
PTPRD-204ENST00000397606 CNTRLQ7Z7A1 2325 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ARGFXA6NJG6 315 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 KCNK2O95069 426 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 CLIC3O95833 236 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF806P0C7X5 589 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 SLC15A1P46059 708 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ACTC1P68032 377 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ACTA1P68133 377 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 PLP2Q04941 152 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 POU4F2Q12837 409 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ADPRMQ3LIE5 342 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF613Q6PF04 617 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 NDUFAF7Q7L592 441 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 PRSS41Q7RTY9 318 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 SFTPA2Q8IWL1 248 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 GPR137CQ8N3F9 429 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF676Q8N7Q3 588 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 BCORP1Q8N888 145 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 PSD4Q8NDX1 1056 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 TRUB1Q8WWH5 349 aaKnown RBP7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF385DQ9H6B1 395 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 PCDHGB2Q9Y5G2 931 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 FRG2CA6NGY1 282 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 WASHC1A8K0Z3 465 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 VSTM5A8MXK1 200 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 FXYD1O00168 92 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 PRKCAP17252 672 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 DPP4P27487 766 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 PEBP1P30086 187 aaKnown RBP7.66□□□□□ -1.18
PTPRD-204ENST00000397606 DAP3P51398 398 aaKnown RBP7.66□□□□□ -1.18
PTPRD-204ENST00000397606 PPP3R1P63098 170 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 VLDLRP98155 873 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 DHRS4L2Q6PKH6 230 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 PARP8Q8N3A8 854 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 SIRT6Q8N6T7 355 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 OR1N1Q8NGS0 311 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 TP53INP1Q96A56 240 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 LRR1Q96L50 414 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 SGCZQ96LD1 299 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 ANKRD19PQ9H560 264 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF337Q9Y3M9 751 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 CDH10Q9Y6N8 788 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 A0A1W2PPL8 197 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 A6NIZ1 184 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 ENO4A6NNW6 628 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF883P0CG24 379 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 TACR3P29371 465 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 SLC6A9P48067 706 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 PNLIPRP2P54317 469 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 MLLT10P55197 1068 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 C21orf58P58505 322 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 RAP1BP61224 184 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 RAP1AP62834 184 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 HSF2Q03933 536 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 PRTGQ2VWP7 1150 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 EEF1A1P5Q5VTE0 462 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 AGAP7PQ5VUJ5 663 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms