RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 HPF1Q9NWY4 346 aa19.41■□□□□ 0.7
CPNE1-204ENST00000397443 STMN3Q9NZ72 180 aa19.41■□□□□ 0.7
CPNE1-204ENST00000397443 SLC35A3Q9Y2D2 325 aa19.41■□□□□ 0.7
CPNE1-204ENST00000397443 ALG1L2C9J202 215 aa19.4■□□□□ 0.7
CPNE1-204ENST00000397443 EFSO43281 561 aa19.4■□□□□ 0.7
CPNE1-204ENST00000397443 HCRTR2O43614 444 aa19.4■□□□□ 0.7
CPNE1-204ENST00000397443 CDC20Q12834 499 aa19.4■□□□□ 0.7
CPNE1-204ENST00000397443 DEFB109BQ30KR1 87 aa19.4■□□□□ 0.7
CPNE1-204ENST00000397443 PRAMEF20Q5VT98 475 aa19.4■□□□□ 0.7
CPNE1-204ENST00000397443 FNDC7Q5VTL7 733 aa19.4■□□□□ 0.7
CPNE1-204ENST00000397443 LINC00696Q6ZRV3 163 aa19.4■□□□□ 0.7
CPNE1-204ENST00000397443 CMIPQ8IY22 773 aa19.4■□□□□ 0.7
CPNE1-204ENST00000397443 GALNT16Q8N428 558 aa19.4■□□□□ 0.7
CPNE1-204ENST00000397443 GALNT4Q8N4A0 578 aa19.4■□□□□ 0.7
CPNE1-204ENST00000397443 RNF217Q8TC41 542 aa19.4■□□□□ 0.7
CPNE1-204ENST00000397443 RASSF4Q9H2L5 321 aa19.4■□□□□ 0.7
CPNE1-204ENST00000397443 NMNAT1Q9HAN9 279 aaPredicted RBP19.4■□□□□ 0.7
CPNE1-204ENST00000397443 A4GNTQ9UNA3 340 aa19.4■□□□□ 0.7
CPNE1-204ENST00000397443 EML6Q6ZMW3 1958 aa19.4■□□□□ 0.7
CPNE1-204ENST00000397443 DMXL2Q8TDJ6 3036 aa19.4■□□□□ 0.7
CPNE1-204ENST00000397443 IGF2RP11717 2491 aa19.39■□□□□ 0.7
CPNE1-204ENST00000397443 TNFRSF11BO00300 401 aa19.39■□□□□ 0.7
CPNE1-204ENST00000397443 CASQ2O14958 399 aaPredicted RBP19.39■□□□□ 0.7
CPNE1-204ENST00000397443 ADAMDEC1O15204 470 aa19.39■□□□□ 0.7
CPNE1-204ENST00000397443 ZNF264O43296 627 aa19.39■□□□□ 0.7
CPNE1-204ENST00000397443 HTR2AP28223 471 aa19.39■□□□□ 0.7
CPNE1-204ENST00000397443 RRADP55042 308 aa19.39■□□□□ 0.7
CPNE1-204ENST00000397443 FGD3Q5JSP0 725 aa19.39■□□□□ 0.7
CPNE1-204ENST00000397443 JMJD6Q6NYC1 403 aaPredicted RBP19.39■□□□□ 0.7
CPNE1-204ENST00000397443 ADAMTS16Q8TE57 1224 aa19.39■□□□□ 0.7
CPNE1-204ENST00000397443 DUSP19Q8WTR2 217 aa19.39■□□□□ 0.7
CPNE1-204ENST00000397443 BARD1Q99728 777 aaKnown RBP19.39■□□□□ 0.7
CPNE1-204ENST00000397443 FNDC11Q9BVV2 318 aa19.39■□□□□ 0.7
CPNE1-204ENST00000397443 COQ10BQ9H8M1 238 aa19.39■□□□□ 0.7
CPNE1-204ENST00000397443 POLHQ9Y253 713 aa19.39■□□□□ 0.7
CPNE1-204ENST00000397443 URB1O60287 2271 aaKnown RBP19.39■□□□□ 0.69
CPNE1-204ENST00000397443 TP53I11O14683 189 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 PRSS23O95084 383 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 GADD45GO95257 159 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 NGFRP08138 427 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 PTNP21246 168 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 PRKACGP22612 351 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 OC90Q02509 493 aaPredicted RBP19.39■□□□□ 0.69
CPNE1-204ENST00000397443 ZNF117Q03924 483 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 OGFRL1Q5TC84 451 aaPredicted RBP19.39■□□□□ 0.69
CPNE1-204ENST00000397443 ABHD17BQ5VST6 288 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 TBPL2Q6SJ96 375 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 STK32CQ86UX6 486 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 ARMC10Q8N2F6 343 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 CADM2Q8N3J6 435 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 TTC9Q92623 222 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 PRRC1Q96M27 445 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 DCBLD2Q96PD2 775 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 KLHDC3Q9BQ90 382 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 TEKT2Q9UIF3 430 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 LYVE1Q9Y5Y7 322 aa19.39■□□□□ 0.69
CPNE1-204ENST00000397443 CHCHD2Q9Y6H1 151 aaPredicted RBP19.39■□□□□ 0.69
CPNE1-204ENST00000397443 G3V2T6 193 aa19.38■□□□□ 0.69
CPNE1-204ENST00000397443 G3V3Y1 287 aa19.38■□□□□ 0.69
CPNE1-204ENST00000397443 SOCS2O14508 198 aa19.38■□□□□ 0.69
CPNE1-204ENST00000397443 CLK3P49761 638 aaKnown RBP19.38■□□□□ 0.69
CPNE1-204ENST00000397443 CCL11P51671 97 aa19.38■□□□□ 0.69
CPNE1-204ENST00000397443 SKP2Q13309 424 aa19.38■□□□□ 0.69
CPNE1-204ENST00000397443 EXOC3L2Q2M3D2 409 aa19.38■□□□□ 0.69
CPNE1-204ENST00000397443 ZBTB49Q6ZSB9 765 aa19.38■□□□□ 0.69
CPNE1-204ENST00000397443 ZNF605Q86T29 641 aa19.38■□□□□ 0.69
CPNE1-204ENST00000397443 ZDHHC13Q8IUH4 622 aa19.38■□□□□ 0.69
CPNE1-204ENST00000397443 GRAMD2AQ8IUY3 354 aa19.38■□□□□ 0.69
CPNE1-204ENST00000397443 CBR4Q8N4T8 237 aa19.38■□□□□ 0.69
CPNE1-204ENST00000397443 PHF10Q8WUB8 498 aaKnown RBP19.38■□□□□ 0.69
CPNE1-204ENST00000397443 SLC29A1Q99808 456 aa19.38■□□□□ 0.69
CPNE1-204ENST00000397443 CCDC86Q9H6F5 360 aaKnown RBP19.38■□□□□ 0.69
CPNE1-204ENST00000397443 ACER3Q9NUN7 267 aa19.38■□□□□ 0.69
CPNE1-204ENST00000397443 GPR83Q9NYM4 423 aa19.38■□□□□ 0.69
CPNE1-204ENST00000397443 A0A1W2PQD3 144 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 NTN1O95631 604 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 NUDT14O95848 222 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 H1F0P07305 194 aaKnown RBP19.37■□□□□ 0.69
CPNE1-204ENST00000397443 ITPKBP27987 946 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 VHLP40337 213 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 ACAA2P42765 397 aaKnown RBP19.37■□□□□ 0.69
CPNE1-204ENST00000397443 OR1Q1Q15612 314 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 ANKRD34AQ69YU3 496 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 ZNF550Q7Z398 422 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 MDGA2Q7Z553 956 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 CYP4Z2PQ8N1L4 340 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 KLHL4Q9C0H6 718 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 PCNX3Q9H6A9 2034 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 TRBV4-1A0A0J9YWV2 114 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 ADRB1P08588 477 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 LINGO3P0C6S8 592 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 CCL3P10147 92 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 DNAJA1P31689 397 aaKnown RBP19.37■□□□□ 0.69
CPNE1-204ENST00000397443 ADH7P40394 386 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 CASP3P42574 277 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 KCNAB2Q13303 367 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 COLEC12Q5KU26 742 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 OR5K1Q8NHB7 308 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 SNIP1Q8TAD8 396 aaKnown RBP19.37■□□□□ 0.69
CPNE1-204ENST00000397443 SDCCAG3Q96C92 435 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms