RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 GPR4P46093 362 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 MMP15P51511 669 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 PRR5P85299 388 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 TGM3Q08188 693 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 CAMK2DQ13557 499 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 SLC9A5Q14940 896 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 CLLU1Q5K131 121 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 CDC73Q6P1J9 531 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 PARM1Q6UWI2 310 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 MEPCEQ7L2J0 689 aaKnown RBP12.39□□□□□ -0.43
TRIM40-207ENST00000396581 AMZ2Q86W34 360 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 TIGD4Q8IY51 512 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 TMIEQ8NEW7 156 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 TTLQ8NG68 377 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 OR51G2Q8NGK0 314 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 GANCQ8TET4 914 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 FGF14Q92915 247 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 YIPF5Q969M3 257 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 ARRDC3Q96B67 414 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 SLC41A3Q96GZ6 507 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 C17orf62Q9BQA9 187 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 ZNF576Q9H609 170 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 TRIM36Q9NQ86 728 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 SLC23A2Q9UGH3 650 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 SLC13A4Q9UKG4 626 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 TEX13CA0A0J9YWL9 993 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 EDDM13A0A1B0GTR0 161 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 A0A1W2PR48 441 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 TBC1D3BA6NDS4 549 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 PGRMC2O15173 223 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 PIP5K1CO60331 668 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 FZD7O75084 574 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 TSC22D2O75157 780 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 UGT2B7P16662 529 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 CXCL3P19876 107 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 GCGRP47871 477 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 ELAVL3Q14576 367 aaKnown RBP12.39□□□□□ -0.43
TRIM40-207ENST00000396581 GSG1Q2KHT4 349 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 TMEM52BQ4KMG9 183 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 METRNLQ641Q3 311 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 HEPHL1Q6MZM0 1159 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 SEZ6L2Q6UXD5 910 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 IL20RBQ6UXL0 311 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 ERN2Q76MJ5 926 aaKnown RBP12.39□□□□□ -0.43
TRIM40-207ENST00000396581 HDDC2Q7Z4H3 204 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 SFTPA1Q8IWL2 248 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 GPALPP1Q8IXQ4 340 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 YAF2Q8IY57 180 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 FBXL6Q8N531 539 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 LINC01555Q8NAE3 123 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 OR5W2Q8NH69 310 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 TMEM255BQ8WV15 326 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 SAMD8Q96LT4 415 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 FCRL4Q96PJ5 515 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 ZCCHC4Q9H5U6 513 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 C12orf10Q9HB07 376 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 KLHL28Q9NXS3 571 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 SPEF1Q9Y4P9 236 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 NPFFR2Q9Y5X5 522 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 TRAV6A0A075B6T7 132 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 A0A0G2JN53 185 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 BTN3A3O00478 584 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 BHLHE40O14503 412 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 UBL3O95164 117 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 PAICSP22234 425 aaKnown RBP12.38□□□□□ -0.43
TRIM40-207ENST00000396581 SRP9P49458 86 aaKnown RBP12.38□□□□□ -0.43
TRIM40-207ENST00000396581 OR10A3P58181 314 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 FXYD6P3P58550 94 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 TAS2R43P59537 309 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 HSF2Q03933 536 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 ZNF234Q14588 700 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 GRK1Q15835 563 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 LGALSLQ3ZCW2 172 aaPredicted RBP12.38□□□□□ -0.43
TRIM40-207ENST00000396581 FNDC3BQ53EP0 1204 aaKnown RBP12.38□□□□□ -0.43
TRIM40-207ENST00000396581 SLC48A1Q6P1K1 146 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 LYPD4Q6UWN0 246 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 PLEKHM3Q6ZWE6 761 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 FGD2Q7Z6J4 655 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 CCDC116Q8IYX3 515 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 TMEM99Q8N816 258 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 TRMT10AQ8TBZ6 339 aaKnown RBP12.38□□□□□ -0.43
TRIM40-207ENST00000396581 GIMAP5Q96F15 307 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 MCHR1Q99705 422 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 KXD1Q9BQD3 176 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 C1QTNF2Q9BXJ5 285 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 PRDM7Q9NQW5 492 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 EMC3Q9P0I2 261 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 ZNF222Q9UK12 451 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 F5P12259 2224 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 GSAPA4D1B5 854 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 SLC9B1P1A6NJY1 282 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 C4orf51C9J302 202 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 SERPIND1P05546 499 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 UBL4AP11441 157 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 F3P13726 295 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 TBXA2RP21731 343 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 ENPP1P22413 925 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 HIST1H1TP22492 207 aaPredicted RBP12.38□□□□□ -0.43
TRIM40-207ENST00000396581 AHRP35869 848 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms