RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 CAPZBP47756 277 aa15.54■□□□□ 0.08
NUP50-202ENST00000396096 PSPHP78330 225 aa15.54■□□□□ 0.08
NUP50-202ENST00000396096 ZNHIT3Q15649 155 aaPredicted RBP15.54■□□□□ 0.08
NUP50-202ENST00000396096 ARMC4Q5T2S8 1044 aa15.54■□□□□ 0.08
NUP50-202ENST00000396096 CPOQ8IVL8 374 aa15.54■□□□□ 0.08
NUP50-202ENST00000396096 CDK20Q8IZL9 346 aa15.54■□□□□ 0.08
NUP50-202ENST00000396096 KLHL36Q8N4N3 616 aa15.54■□□□□ 0.08
NUP50-202ENST00000396096 POC5Q8NA72 575 aa15.54■□□□□ 0.08
NUP50-202ENST00000396096 TSTD1Q8NFU3 115 aa15.54■□□□□ 0.08
NUP50-202ENST00000396096 OR4F15Q8NGB8 312 aa15.54■□□□□ 0.08
NUP50-202ENST00000396096 ABHD8Q96I13 439 aa15.54■□□□□ 0.08
NUP50-202ENST00000396096 VSTM2LQ96N03 204 aa15.54■□□□□ 0.08
NUP50-202ENST00000396096 COQ7Q99807 217 aa15.54■□□□□ 0.08
NUP50-202ENST00000396096 C2orf42Q9NWW7 574 aa15.54■□□□□ 0.08
NUP50-202ENST00000396096 ERVK13-1Q9NX77 482 aa15.54■□□□□ 0.08
NUP50-202ENST00000396096 ZNF229Q9UJW7 825 aa15.54■□□□□ 0.08
NUP50-202ENST00000396096 MRPS33Q9Y291 106 aaKnown RBP15.54■□□□□ 0.08
NUP50-202ENST00000396096 MED31Q9Y3C7 131 aa15.54■□□□□ 0.08
NUP50-202ENST00000396096 CSNK1G3Q9Y6M4 447 aa15.54■□□□□ 0.08
NUP50-202ENST00000396096 TRDV1A0A1B0GX56 115 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 TGFBR3LH3BV60 316 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 HRO43593 1189 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 CHP2O43745 196 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 NSA2O95478 260 aaKnown RBP15.53■□□□□ 0.08
NUP50-202ENST00000396096 NME1P15531 152 aaKnown RBP15.53■□□□□ 0.08
NUP50-202ENST00000396096 BMP8BP34820 402 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 CD79BP40259 229 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 GABRA4P48169 554 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 SLC9A3P48764 834 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 SLC13A2Q13183 592 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 FAM53BQ14153 422 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 ELOCQ15369 112 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 C22orf42Q6IC83 251 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 NIPAL3Q6P499 406 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 LHFPL3Q86UP9 236 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 ARL14Q8N4G2 192 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 OR6C4Q8NGE1 309 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 ASB15Q8WXK1 588 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 CNOT9Q92600 299 aaKnown RBP15.53■□□□□ 0.08
NUP50-202ENST00000396096 RIT1Q92963 219 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 BPIFA2Q96DR5 249 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 ZNF426Q9BUY5 554 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 ATP13A2Q9NQ11 1180 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 IL20RAQ9UHF4 553 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 SIGLEC7Q9Y286 467 aa15.53■□□□□ 0.08
NUP50-202ENST00000396096 A0A1W2PR77 199 aa15.52■□□□□ 0.08
NUP50-202ENST00000396096 NPIPB9F8W1W9 429 aa15.52■□□□□ 0.08
NUP50-202ENST00000396096 SOCS6O14544 535 aa15.52■□□□□ 0.08
NUP50-202ENST00000396096 AKAP8O43823 692 aaKnown RBP15.52■□□□□ 0.08
NUP50-202ENST00000396096 WNT1P04628 370 aa15.52■□□□□ 0.08
NUP50-202ENST00000396096 BMP7P18075 431 aa15.52■□□□□ 0.08
NUP50-202ENST00000396096 RBM34P42696 430 aaKnown RBP15.52■□□□□ 0.08
NUP50-202ENST00000396096 ACAA2P42765 397 aaKnown RBP15.52■□□□□ 0.08
NUP50-202ENST00000396096 SEPHS1P49903 392 aa15.52■□□□□ 0.08
NUP50-202ENST00000396096 ZNF141Q15928 474 aa15.52■□□□□ 0.08
NUP50-202ENST00000396096 LRIT3Q3SXY7 679 aa15.52■□□□□ 0.08
NUP50-202ENST00000396096 PDZK1Q5T2W1 519 aa15.52■□□□□ 0.08
NUP50-202ENST00000396096 SLC43A2Q8N370 569 aa15.52■□□□□ 0.08
NUP50-202ENST00000396096 TRIM2Q9C040 744 aa15.52■□□□□ 0.08
NUP50-202ENST00000396096 DNAJB12Q9NXW2 375 aaKnown RBP15.52■□□□□ 0.08
NUP50-202ENST00000396096 FLRT3Q9NZU0 649 aa15.52■□□□□ 0.08
NUP50-202ENST00000396096 TNFRSF10DQ9UBN6 386 aa15.52■□□□□ 0.08
NUP50-202ENST00000396096 YARS2Q9Y2Z4 477 aaKnown RBP15.52■□□□□ 0.08
NUP50-202ENST00000396096 CLDN16Q9Y5I7 305 aa15.52■□□□□ 0.08
NUP50-202ENST00000396096 V9GYH0 126 aa15.52■□□□□ 0.08
NUP50-202ENST00000396096 UNC80Q8N2C7 3258 aa15.52■□□□□ 0.08
NUP50-202ENST00000396096 MBTPS2O43462 519 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 PTP4A3O75365 173 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 LALBAP00709 142 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 IGKV1D-16P01601 117 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 PROS1P07225 676 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 CD27P26842 260 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 DEFA1P59665 94 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 DEFA3P59666 94 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 BDH1Q02338 343 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 STX4Q12846 297 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 SMAD4Q13485 552 aaKnown RBP15.52■□□□□ 0.07
NUP50-202ENST00000396096 CRTC2Q53ET0 693 aaPredicted RBP15.52■□□□□ 0.07
NUP50-202ENST00000396096 MEPCEQ7L2J0 689 aaKnown RBP15.52■□□□□ 0.07
NUP50-202ENST00000396096 BMP8AQ7Z5Y6 402 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 C17orf82Q86X59 251 aaPredicted RBP15.52■□□□□ 0.07
NUP50-202ENST00000396096 GKN2Q86XP6 184 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 LSMEM1Q8N8F7 131 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 FAM181AQ8N9Y4 354 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 TMEM203Q969S6 136 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 C1GALT1C1Q96EU7 318 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 RBM18Q96H35 190 aaKnown RBP15.52■□□□□ 0.07
NUP50-202ENST00000396096 ZNF578Q96N58 590 aaPredicted RBP15.52■□□□□ 0.07
NUP50-202ENST00000396096 MAP3K3Q99759 626 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.52■□□□□ 0.07
NUP50-202ENST00000396096 ENKD1Q9H0I2 346 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 MEPEQ9NQ76 525 aaPredicted RBP15.52■□□□□ 0.07
NUP50-202ENST00000396096 PRTFDC1Q9NRG1 225 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 CMC2Q9NRP2 79 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.52■□□□□ 0.07
NUP50-202ENST00000396096 HCN3Q9P1Z3 774 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 PLEKHB1Q9UF11 243 aaPredicted RBP15.52■□□□□ 0.07
NUP50-202ENST00000396096 GSTK1Q9Y2Q3 226 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 CMAHPQ9Y471 501 aa15.52■□□□□ 0.07
NUP50-202ENST00000396096 XIRP2A4UGR9 3374 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms