RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 CNPPD1Q9BV87 410 aa6.44□□□□□ -1.38
RTN4-205ENST00000394609 SLC38A1Q9H2H9 487 aa6.44□□□□□ -1.38
RTN4-205ENST00000394609 MARCH7Q9H992 704 aa6.44□□□□□ -1.38
RTN4-205ENST00000394609 SRA1Q9HD15 236 aaKnown RBP6.44□□□□□ -1.38
RTN4-205ENST00000394609 SACM1LQ9NTJ5 587 aa6.44□□□□□ -1.38
RTN4-205ENST00000394609 EXD2Q9NVH0 621 aa6.44□□□□□ -1.38
RTN4-205ENST00000394609 RLIMQ9NVW2 624 aa6.44□□□□□ -1.38
RTN4-205ENST00000394609 SCN3BQ9NY72 215 aa6.44□□□□□ -1.38
RTN4-205ENST00000394609 TMEFF2Q9UIK5 374 aaPredicted RBP6.44□□□□□ -1.38
RTN4-205ENST00000394609 CLDN16Q9Y5I7 305 aa6.44□□□□□ -1.38
RTN4-205ENST00000394609 ORC6Q9Y5N6 252 aa6.44□□□□□ -1.38
RTN4-205ENST00000394609 A0A0G2JPF8 293 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 LOC100130705A0A1B0GUX0 176 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 GXYLT2A0PJZ3 443 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 A8MUA0 341 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 HNRNPCL2B2RXH8 293 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 HNRNPCL3B7ZW38 293 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 LOC110117498-PIK3R3F6TDL0 507 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 TNFRSF11BO00300 401 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 FFAR1O14842 300 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 FRS3O43559 492 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 NDUFB5O43674 189 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 PRKNO60260 465 aaPredicted RBP6.43□□□□□ -1.38
RTN4-205ENST00000394609 TIAF1O95411 115 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 EPPINO95925 133 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 HNRNPCL4P0DMR1 293 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 ITGA2P17301 1181 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 TNNI3P19429 210 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 S1PR1P21453 382 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 FPR1P21462 350 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 NOS3P29474 1203 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 PIGAP37287 484 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 DDOSTP39656 456 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 RFX3P48380 749 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 DAPP51397 102 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 HSD17B7P56937 341 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 SLC35A2P78381 396 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 EMX1Q04741 257 aaPredicted RBP6.43□□□□□ -1.38
RTN4-205ENST00000394609 MAP4K2Q12851 820 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 ZNF155Q12901 538 aaPredicted RBP6.43□□□□□ -1.38
RTN4-205ENST00000394609 SQSTM1Q13501 440 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 GNA13Q14344 377 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 CDK10Q15131 360 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 ZNF404Q494X3 552 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 ZNF311Q5JNZ3 666 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 ARHGAP40Q5TG30 622 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 UBE2UQ5VVX9 321 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 HEPHL1Q6MZM0 1159 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 TCTN3Q6NUS6 607 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 DEF8Q6ZN54 512 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 SHISA6Q6ZSJ9 500 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 USP43Q70EL4 1123 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 COX18Q8N8Q8 333 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 CDRT4Q8N9R6 151 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 ATG16L2Q8NAA4 619 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 SLC38A9Q8NBW4 561 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 ZNF675Q8TD23 568 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 APOBEC4Q8WW27 367 aaKnown RBP6.43□□□□□ -1.38
RTN4-205ENST00000394609 TSLPQ969D9 159 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 CLIP3Q96DZ5 547 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 ZNF354BQ96LW1 612 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 PIP5K1AQ99755 562 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 ARPC5LQ9BPX5 153 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 SLC7A5P2Q9GIP4 190 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 GABARAPL1Q9H0R8 117 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 ZNF304Q9HCX3 659 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 BCL2L10Q9HD36 194 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 PNO1Q9NRX1 252 aaKnown RBP6.43□□□□□ -1.38
RTN4-205ENST00000394609 THSD1Q9NS62 852 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 LANCL2Q9NS86 450 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 FBXO34Q9NWN3 711 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 ZNF221Q9UK13 617 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 ERVK-19Q9WJR5 959 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 LIPT1Q9Y234 373 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 TRAPPC4Q9Y296 219 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 WDR45Q9Y484 360 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 PCDHGB3Q9Y5G1 929 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 LYVE1Q9Y5Y7 322 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 ENPP4Q9Y6X5 453 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 PMF1-BGLAPU3KQ54 211 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 NPIPA5A0A0B4J1W7 369 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 CENPVL1A0A0U1RR11 272 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 A0A1B0GX78 115 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 LNP1A1A4G5 178 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 METTL15A6NJ78 407 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 NPIPA7E9PJI5 369 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 PCDH17O14917 1159 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 DSCR3O14972 297 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 ADAMDEC1O15204 470 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 TOX3O15405 576 aaPredicted RBP6.43□□□□□ -1.38
RTN4-205ENST00000394609 TPST2O60704 377 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 ALPPP05187 535 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 MSL3P1P0C860 447 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 NPIPA8P0DM63 369 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 CYP4B1P13584 511 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 POU2F1P14859 743 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 RHCEP18577 417 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 FBLP22087 321 aaKnown RBP6.43□□□□□ -1.38
RTN4-205ENST00000394609 IGFBP5P24593 272 aa6.43□□□□□ -1.38
RTN4-205ENST00000394609 EFNA3P52797 238 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms