RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 GP6Q9HCN6 339 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 MID1IP1Q9NPA3 183 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 NGBQ9NPG2 151 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 NTMQ9P121 344 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 WBP11Q9Y2W2 641 aaKnown RBP13.64□□□□□ -0.23
CHMP3-202ENST00000393773 IGHV4-30-2A0A087WSY4 118 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 A0A1W2PQD3 144 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 SHISA9B4DS77 424 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 ZNF814B7Z6K7 855 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 EFNA2O43921 213 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 GPRIN2O60269 458 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 RSL1D1O76021 490 aaKnown RBP13.63□□□□□ -0.23
CHMP3-202ENST00000393773 ADAP00813 363 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 PABPC4LP0CB38 370 aaKnown RBP13.63□□□□□ -0.23
CHMP3-202ENST00000393773 FAM157CP0CG43 387 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 MANFP55145 182 aaKnown RBP13.63□□□□□ -0.23
CHMP3-202ENST00000393773 CARD18P57730 90 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 ZNF117Q03924 483 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 P2RY6Q15077 328 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 DUSP5Q16690 384 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 IMPG1Q17R60 797 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 VPS26BQ4G0F5 336 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 ZNF385BQ569K4 471 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 GTF2IRD2BQ6EKJ0 949 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 ANKRD26P1Q6NSI1 321 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 NOXRED1Q6NXP6 359 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 TIFABQ6ZNK6 161 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 FCRLAQ7L513 359 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 TRIM46Q7Z4K8 759 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 GTF2IRD2Q86UP8 949 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 LCA5Q86VQ0 697 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 MISPQ8IVT2 679 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 SLC16A11Q8NCK7 471 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 B4GALNT2Q8NHY0 566 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 TNFRSF12AQ9NP84 129 aa13.63□□□□□ -0.23
CHMP3-202ENST00000393773 ING1Q9UK53 422 aaPredicted RBP13.63□□□□□ -0.23
CHMP3-202ENST00000393773 NPIPB8E9PQR5 432 aa13.62□□□□□ -0.23
CHMP3-202ENST00000393773 OIP5O43482 229 aa13.62□□□□□ -0.23
CHMP3-202ENST00000393773 RAMP1O60894 148 aa13.62□□□□□ -0.23
CHMP3-202ENST00000393773 LCN1P31025 176 aa13.62□□□□□ -0.23
CHMP3-202ENST00000393773 CASQ1P31415 396 aa13.62□□□□□ -0.23
CHMP3-202ENST00000393773 GPC1P35052 558 aa13.62□□□□□ -0.23
CHMP3-202ENST00000393773 FRKP42685 505 aaPredicted RBP13.62□□□□□ -0.23
CHMP3-202ENST00000393773 CDH11P55287 796 aa13.62□□□□□ -0.23
CHMP3-202ENST00000393773 ITGADQ13349 1161 aa13.62□□□□□ -0.23
CHMP3-202ENST00000393773 CCNJQ5T5M9 372 aa13.62□□□□□ -0.23
CHMP3-202ENST00000393773 BHLHA15Q7RTS1 189 aaPredicted RBP13.62□□□□□ -0.23
CHMP3-202ENST00000393773 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.62□□□□□ -0.23
CHMP3-202ENST00000393773 MMGT1Q8N4V1 131 aa13.62□□□□□ -0.23
CHMP3-202ENST00000393773 NUP43Q8NFH3 380 aa13.62□□□□□ -0.23
CHMP3-202ENST00000393773 OR6Y1Q8NGX8 325 aa13.62□□□□□ -0.23
CHMP3-202ENST00000393773 OTUB1Q96FW1 271 aaPredicted RBP13.62□□□□□ -0.23
CHMP3-202ENST00000393773 FMO2Q99518 471 aa13.62□□□□□ -0.23
CHMP3-202ENST00000393773 NPAP1Q9NZP6 1156 aa13.62□□□□□ -0.23
CHMP3-202ENST00000393773 CCL27Q9Y4X3 112 aa13.62□□□□□ -0.23
CHMP3-202ENST00000393773 NUP214P35658 2090 aaPredicted RBP13.61□□□□□ -0.23
CHMP3-202ENST00000393773 A0A087WUV0 522 aaPredicted RBP13.61□□□□□ -0.23
CHMP3-202ENST00000393773 GOLGA8QA0A0J9YX86 632 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 EXOC1LA0A1B0GW35 172 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 GOLGA8OA6NCC3 632 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 GOLGA8NF8WBI6 632 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 GOLGA8RI6L899 631 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 SCDO00767 359 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 LYZL6O75951 148 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 COX5AP20674 150 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 PRPH2P23942 346 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 EDNRAP25101 427 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 EIF1P41567 113 aaKnown RBP13.61□□□□□ -0.23
CHMP3-202ENST00000393773 PDE7AQ13946 482 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 KIAA0040Q15053 153 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 NRF1Q16656 503 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 C11orf71Q6IPW1 123 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 SYT10Q6XYQ8 523 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 Q6ZT83 130 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 ZFP90Q8TF47 636 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 REXO5Q96IC2 774 aaKnown RBP13.61□□□□□ -0.23
CHMP3-202ENST00000393773 USB1Q9BQ65 265 aaKnown RBP13.61□□□□□ -0.23
CHMP3-202ENST00000393773 PSD2Q9BQI7 771 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 ALG2Q9H553 416 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 CXorf36Q9H7Y0 433 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 BCO1Q9HAY6 547 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 TIGARQ9NQ88 270 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 UBQLN4Q9NRR5 601 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 FAIMQ9NVQ4 179 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 CDC42EP3Q9UKI2 254 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 B3GALT5Q9Y2C3 310 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 ARFGEF3Q5TH69 2177 aa13.61□□□□□ -0.23
CHMP3-202ENST00000393773 KIF2AO00139 706 aaPredicted RBP13.6□□□□□ -0.23
CHMP3-202ENST00000393773 SSX4O60224 188 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 TBX19O60806 448 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 YES1P07947 543 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 OR3A2P47893 321 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 PRKAG1P54619 331 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 C21orf58P58505 322 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 ETF1P62495 437 aaKnown RBP13.6□□□□□ -0.23
CHMP3-202ENST00000393773 IRX1P78414 480 aaPredicted RBP13.6□□□□□ -0.23
CHMP3-202ENST00000393773 TMEM249Q2WGJ8 235 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 KRTAP24-1Q3LI83 254 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 CBLN3Q6UW01 205 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 FRMD7Q6ZUT3 714 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms