RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 YRDCQ86U90 279 aaKnown RBP16.92■□□□□ 0.3
SNCB-202ENST00000393693 DHFR2Q86XF0 187 aa16.92■□□□□ 0.3
SNCB-202ENST00000393693 GALNT12Q8IXK2 581 aa16.92■□□□□ 0.3
SNCB-202ENST00000393693 MBD3L2Q8NHZ7 208 aaPredicted RBP16.92■□□□□ 0.3
SNCB-202ENST00000393693 ABTB1Q969K4 478 aaPredicted RBP16.92■□□□□ 0.3
SNCB-202ENST00000393693 EXOSC8Q96B26 276 aaKnown RBP16.92■□□□□ 0.3
SNCB-202ENST00000393693 FAM120BQ96EK7 910 aaKnown RBP16.92■□□□□ 0.3
SNCB-202ENST00000393693 BBS4Q96RK4 519 aa16.92■□□□□ 0.3
SNCB-202ENST00000393693 CPPED1Q9BRF8 314 aaPredicted RBP16.92■□□□□ 0.3
SNCB-202ENST00000393693 DCLRE1BQ9H816 532 aa16.92■□□□□ 0.3
SNCB-202ENST00000393693 SLC35C2Q9NQQ7 365 aa16.92■□□□□ 0.3
SNCB-202ENST00000393693 SLC25A37Q9NYZ2 338 aa16.92■□□□□ 0.3
SNCB-202ENST00000393693 JKAMPQ9P055 326 aa16.92■□□□□ 0.3
SNCB-202ENST00000393693 UTS2RQ9UKP6 389 aa16.92■□□□□ 0.3
SNCB-202ENST00000393693 DTX4Q9Y2E6 619 aa16.92■□□□□ 0.3
SNCB-202ENST00000393693 ZNF780BQ9Y6R6 833 aa16.92■□□□□ 0.3
SNCB-202ENST00000393693 FLNAP21333 2647 aaKnown RBP16.92■□□□□ 0.3
SNCB-202ENST00000393693 C2orf72A6NCS6 295 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 CLIC1O00299 241 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 KRT75O95678 551 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 C6orf47O95873 294 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 HOXB9P17482 250 aaPredicted RBP16.91■□□□□ 0.3
SNCB-202ENST00000393693 PTPN6P29350 595 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 CDKN2CP42773 168 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 FOXF2Q12947 444 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 SNCBQ16143 134 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 NNATQ16517 81 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 OR52E8Q6IFG1 317 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 SLC48A1Q6P1K1 146 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 PLXDC2Q6UX71 529 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 IFNEQ86WN2 208 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 KIF18BQ86Y91 864 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 MSRB3Q8IXL7 192 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 CIDECQ96AQ7 238 aaPredicted RBP16.91■□□□□ 0.3
SNCB-202ENST00000393693 NTNG2Q96CW9 530 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 TMEM41AQ96HV5 264 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 SECISBP2Q96T21 854 aaKnown RBP16.91■□□□□ 0.3
SNCB-202ENST00000393693 NXF5Q9H1B4 397 aaKnown RBP16.91■□□□□ 0.3
SNCB-202ENST00000393693 NEUROD4Q9HD90 331 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 RYDENQ9NUL5 291 aaKnown RBP16.91■□□□□ 0.3
SNCB-202ENST00000393693 GMEB1Q9Y692 573 aa16.91■□□□□ 0.3
SNCB-202ENST00000393693 A0A1W2PPR1 153 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 CLCA1A8K7I4 914 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 ACOT8O14734 319 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 GSTA4O15217 222 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 PSMG1O95456 288 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 ABCB1P08183 1280 aaPredicted RBP16.9■□□□□ 0.3
SNCB-202ENST00000393693 NT5EP21589 574 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 UQCRC2P22695 453 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 ABCD3P28288 659 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 OPRM1P35372 400 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 FRKP42685 505 aaPredicted RBP16.9■□□□□ 0.3
SNCB-202ENST00000393693 XKP51811 444 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 NRG3P56975 720 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 SF3B4Q15427 424 aaKnown RBP eCLIP16.9■□□□□ 0.3
SNCB-202ENST00000393693 GTDC1Q4AE62 458 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 TIGD3Q6B0B8 471 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 ANGPTL8Q6UXH0 198 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 FAM156AQ8NDB6 213 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 FAM83FQ8NEG4 500 aaPredicted RBP16.9■□□□□ 0.3
SNCB-202ENST00000393693 BHLHE22Q8NFJ8 381 aaPredicted RBP16.9■□□□□ 0.3
SNCB-202ENST00000393693 OR2T12Q8NG77 320 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 SLC26A7Q8TE54 656 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 NODALQ96S42 347 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 YIPF4Q9BSR8 244 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 SPATA9Q9BWV2 254 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 CALHM2Q9HA72 323 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 TPT1P8Q9HAU6 139 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 ACTR3BQ9P1U1 418 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 MAGEL2Q9UJ55 1249 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 SNX13Q9Y5W8 968 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 MPDZO75970 2070 aa16.9■□□□□ 0.3
SNCB-202ENST00000393693 FAM220BPB1ANY3 271 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 ERAL1O75616 437 aaKnown RBP16.89■□□□□ 0.29
SNCB-202ENST00000393693 TMIGD3P0DMS9 266 aaPredicted RBP16.89■□□□□ 0.29
SNCB-202ENST00000393693 CSNK2A2P19784 350 aaPredicted RBP16.89■□□□□ 0.29
SNCB-202ENST00000393693 EFNA1P20827 205 aaPredicted RBP16.89■□□□□ 0.29
SNCB-202ENST00000393693 S1PR1P21453 382 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 HOXC12P31275 282 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 MPIP34949 423 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 MSX2P35548 267 aaPredicted RBP16.89■□□□□ 0.29
SNCB-202ENST00000393693 CHI3L1P36222 383 aaPredicted RBP16.89■□□□□ 0.29
SNCB-202ENST00000393693 TMED10P49755 219 aaKnown RBP16.89■□□□□ 0.29
SNCB-202ENST00000393693 HBA1P69905 142 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 RPP38P78345 283 aaKnown RBP16.89■□□□□ 0.29
SNCB-202ENST00000393693 SORDQ00796 357 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 MS4A2Q01362 244 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 LTBQ06643 244 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 CCNIQ14094 377 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 SELPLGQ14242 412 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 ZFP1Q6P2D0 407 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 ERICH5Q6P6B1 374 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 FAM111BQ6SJ93 734 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 SPATA24Q86W54 205 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 KRTAP1-3Q8IUG1 177 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 SIMC1Q8NDZ2 872 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 OR4K14Q8NGD5 310 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 OR1J4Q8NGS1 313 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 OR10A6Q8NH74 314 aa16.89■□□□□ 0.29
SNCB-202ENST00000393693 ZFP90Q8TF47 636 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms