RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 ARL14Q8N4G2 192 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 TEFMQ96QE5 360 aaKnown RBP17.7■□□□□ 0.42
CCDC50-202ENST00000392456 DNAJB9Q9UBS3 223 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 MAGEL2Q9UJ55 1249 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 SLC9B1P1A6NJY1 282 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 TMPRSS11DO60235 418 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 SLC43A1O75387 559 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 CCNB2O95067 398 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 ZNF806P0C7X5 589 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 FAM157BP0CG42 384 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 MAP2K3P46734 347 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 AFF3P51826 1226 aaKnown RBP17.7■□□□□ 0.42
CCDC50-202ENST00000392456 ZIC1Q15915 447 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 LGALSLQ3ZCW2 172 aaPredicted RBP17.7■□□□□ 0.42
CCDC50-202ENST00000392456 SLC25A25Q6KCM7 469 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 BBS4Q96RK4 519 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 EQTNQ9NQ60 294 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 SH3BP4Q9P0V3 963 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 TRBV5-3A0A0A0MS03 114 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 A0A0G2JPF8 293 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 LOC390937A0A1W2PQ73 354 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 C2orf74A8MZ97 194 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 HNRNPCL3B7ZW38 293 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 NDUFS4O43181 175 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 IL3P08700 152 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 HNRNPCL4P0DMR1 293 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 CSNK2BP67870 215 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 C2orf80Q0P641 193 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 TRAM2Q15035 370 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 MPEG1Q2M385 716 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 VASNQ6EMK4 673 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 ZNF793Q6ZN11 406 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 RAB11FIP2Q7L804 512 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 VN1R4Q7Z5H5 301 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 LAX1Q8IWV1 398 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 WDR36Q8NI36 951 aaKnown RBP17.69■□□□□ 0.42
CCDC50-202ENST00000392456 UPRTQ96BW1 309 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 ACTR6Q9GZN1 396 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 FSCN3Q9NQT6 498 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 UFSP2Q9NUQ7 469 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 PLOD3O60568 738 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 CLEC3AO75596 197 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 FHP07954 510 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 FGF2P09038 288 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 APEHP13798 732 aaKnown RBP17.69■□□□□ 0.42
CCDC50-202ENST00000392456 HOXB9P17482 250 aaPredicted RBP17.69■□□□□ 0.42
CCDC50-202ENST00000392456 DHPSP49366 369 aaPredicted RBP17.69■□□□□ 0.42
CCDC50-202ENST00000392456 RNF4P78317 190 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 RFX4Q33E94 735 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 FAM98BQ52LJ0 330 aaKnown RBP17.69■□□□□ 0.42
CCDC50-202ENST00000392456 FAM71E1Q6IPT2 247 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 SPESP1Q6UW49 350 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 AHSA2Q719I0 299 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 KRT74Q7RTS7 529 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 TMEM132CQ8N3T6 1108 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 OR6C4Q8NGE1 309 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 OR8J2Q8NGG1 315 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 MARVELD1Q9BSK0 173 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 PRMT8Q9NR22 394 aaPredicted RBP17.69■□□□□ 0.42
CCDC50-202ENST00000392456 AP1M2Q9Y6Q5 423 aa17.69■□□□□ 0.42
CCDC50-202ENST00000392456 SCN3AQ9NY46 2000 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 SPTBP11277 2137 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 PRMT3O60678 531 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 DHFRP00374 187 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 RLN2P04090 185 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 HEXBP07686 556 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 FBP1P09467 338 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 ASMTP46597 345 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 PCP4P48539 62 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 ZNF81P51508 661 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 C21orf58P58505 322 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 SLC14A1Q13336 389 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 TBCEQ15813 527 aaPredicted RBP17.68■□□□□ 0.42
CCDC50-202ENST00000392456 CPTPQ5TA50 214 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 LNX2Q8N448 690 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 STX19Q8N4C7 294 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 DTWD1Q8N5C7 304 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 SLC22A18Q96BI1 424 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 GFM1Q96RP9 751 aaKnown RBP17.68■□□□□ 0.42
CCDC50-202ENST00000392456 DUSP26Q9BV47 211 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 SARGQ9BW04 601 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 C5AR2Q9P296 337 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 SNX11Q9Y5W9 270 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 CLCA3PQ9Y6N3 262 aa17.68■□□□□ 0.42
CCDC50-202ENST00000392456 HCRTR1O43613 425 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 GPR37L1O60883 481 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 PIAS2O75928 621 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 FURINP09958 794 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 RAB8AP61006 207 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 HNRNPKP61978 463 aaKnown RBP eCLIP17.67■□□□□ 0.42
CCDC50-202ENST00000392456 SRSF11Q05519 484 aaKnown RBP17.67■□□□□ 0.42
CCDC50-202ENST00000392456 TM4SF18Q96CE8 201 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 MS4A6EQ96DS6 147 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 SPASTQ9UBP0 616 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 PCDH15Q96QU1 1955 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 LOC105369274A0A096LPK9 316 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 LOC102723532A0A0G2JNH3 316 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 ZNF729A6NN14 1252 aaPredicted RBP17.67■□□□□ 0.42
CCDC50-202ENST00000392456 RFXANKO14593 260 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 CASC3O15234 703 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms